ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-r.6	100280426	uncharacterized LOC100280426
zma-u.5	100280426	uncharacterized LOC100280426
zma-u.5	103646027	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
zma-u.5	103653921	Putative regulator of chromosome condensation (RCC1) family protein
zma-u.5	103636281	Putative regulator of chromosome condensation (RCC1) family protein
sbi-r.1	8077365	uncharacterized LOC8077365
sbi-r.1	8057696	uncharacterized LOC8057696
osa-u.5	4338654	PH, RCC1 and FYVE domains-containing protein 1
osa-u.5	4336778	PH, RCC1 and FYVE domains-containing protein 1
tae-r.2	123080719	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123445529	PH, RCC1 and FYVE domains-containing protein 1-like
hvu-r.1	123427836	PH, RCC1 and FYVE domains-containing protein 1
hvu-r.1	123407055	PH, RCC1 and FYVE domains-containing protein 1-like
bdi-r.1	100825305	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100834588	PH, RCC1 and FYVE domains-containing protein 1
bdi-r.1	100836916	PH, RCC1 and FYVE domains-containing protein 1
ath-u.5	AT5G12350	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT5G19420	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
ath-u.5	AT1G65920	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
gma-u.5	100794953	PH, RCC1 and FYVE domains-containing protein 1
gma-u.5	G93	PH/RCC1/FYVE zinc finger domain-containing protein G93
gma-u.5	100802464	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101265608	PH, RCC1 and FYVE domains-containing protein 1
sly-u.5	101256573	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103856379	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103846644	PH, RCC1 and FYVE domains-containing protein 1
bra-r.6	103849089	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100250008	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100253065	PH, RCC1 and FYVE domains-containing protein 1
vvi-u.5	100248282	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7496775	PH, RCC1 and FYVE domains-containing protein 1
ppo-u.5	7476847	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	112417506	PH, RCC1 and FYVE domains-containing protein 1
mtr-u.5	112419908	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107895189	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107912868	PH, RCC1 and FYVE domains-containing protein 1
ghi-r.1	107915135	PH, RCC1 and FYVE domains-containing protein 1
bna-r.1	106434266	PH, RCC1 and FYVE domains-containing protein 1-like
bna-r.1	106372363	PH, RCC1 and FYVE domains-containing protein 1
sot-r.1	102588539	uncharacterized LOC102588539
sot-r.1	102590844	uncharacterized LOC102590844
cit-r.1	102612328	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102623335	PH, RCC1 and FYVE domains-containing protein 1
cit-r.1	102623949	PH, RCC1 and FYVE domains-containing protein 1
nta-r.1	107782649	PH, RCC1 and FYVE domains-containing protein 1-like
nta-r.1	107796116	PH, RCC1 and FYVE domains-containing protein 1-like
cre-r.1	CHLRE_16g691050v5	uncharacterized protein

Top 50 coexpressed genes to 100280426 (zma-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100280426 (zma-r.6 coexpression data)

CoexMap"100280426"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(2153 genes)

IEA

Protein

NP_001146821.2 [sequence] [blastp]
XP_020405287.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, plas 1	(predict for NP_001146821.2)
nucl 9	(predict for XP_020405287.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001146821.2)
other 9	(predict for XP_020405287.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100280426	zma-u.5 for 100280426	zma-u.5 for 103646027	zma-u.5 for 103653921	zma-u.5 for 103636281	sbi-r.1 for 8077365	sbi-r.1 for 8057696	osa-u.5 for 4338654	osa-u.5 for 4336778	tae-r.2 for 123080719	hvu-r.1 for 123445529	hvu-r.1 for 123427836	hvu-r.1 for 123407055	bdi-r.1 for 100825305	bdi-r.1 for 100834588	bdi-r.1 for 100836916	ath-u.5 for AT5G12350	ath-u.5 for AT5G19420	ath-u.5 for AT1G65920	gma-u.5 for 100794953	gma-u.5 for G93	gma-u.5 for 100802464	sly-u.5 for 101265608	sly-u.5 for 101256573	bra-r.6 for 103856379	bra-r.6 for 103846644	bra-r.6 for 103849089	vvi-u.5 for 100250008	vvi-u.5 for 100253065	vvi-u.5 for 100248282	ppo-u.5 for 7496775	ppo-u.5 for 7476847	mtr-u.5 for 112417506	mtr-u.5 for 112419908	ghi-r.1 for 107895189	ghi-r.1 for 107912868	ghi-r.1 for 107915135	bna-r.1 for 106434266	bna-r.1 for 106372363	sot-r.1 for 102588539	sot-r.1 for 102590844	cit-r.1 for 102612328	cit-r.1 for 102623335	cit-r.1 for 102623949	nta-r.1 for 107782649	nta-r.1 for 107796116	cre-r.1 for CHLRE_16g691050v5

Ortholog

Ortholog ID: 695

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

G93

Function^*

Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain

Putative regulator of chromosome condensation (RCC1) family protein

uncharacterized LOC8077365

uncharacterized LOC8057696