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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5  100253065  PH, RCC1 and FYVE domains-containing protein 1 
 vvi-r.5  100253065  PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5  100250008  PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5  100248282  PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5  100244665  PH, RCC1 and FYVE domains-containing protein 1 
 ath-u.5  AT5G12350  Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-u.5  AT5G19420  Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-u.5  AT1G65920  Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 gma-u.5  100806439  PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5  100802464  PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5  100797527  PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5  18106548  PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5  7476847  PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5  11406734  PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5  11425815  PH, RCC1 and FYVE domains-containing protein 1 
 sly-u.5  101256573  PH, RCC1 and FYVE domains-containing protein 1 
 sly-u.5  101257851  PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5  4338654  PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5  4325746  PH, RCC1 and FYVE domains-containing protein 1 
 zma-u.5  103653921  Putative regulator of chromosome condensation (RCC1) family protein 
 zma-u.5  103646027  Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 
 zma-u.5  103636281  Putative regulator of chromosome condensation (RCC1) family protein 

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Top 50 coexpressed genes to 100253065 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100253065 (vvi-u.5 coexpression data)

CoexMap"100253065"


vviLOC100253065 | Entrez gene ID : 100253065
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (2138 genes)  IEA  
Protein XP_010648895.2 [sequence] [blastp]
XP_059592296.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_010648895.2)
nucl 10  (predict for XP_059592296.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010648895.2)
other 8  (predict for XP_059592296.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-u.5
for
100253065


vvi-r.5
for
100253065


vvi-u.5
for
100250008


vvi-u.5
for
100248282


vvi-u.5
for
100244665


ath-u.5
for
AT5G12350


ath-u.5
for
AT5G19420


ath-u.5
for
AT1G65920


gma-u.5
for
100806439


gma-u.5
for
100802464


gma-u.5
for
100797527


ppo-u.5
for
18106548


ppo-u.5
for
7476847


mtr-u.5
for
11406734


mtr-u.5
for
11425815


sly-u.5
for
101256573


sly-u.5
for
101257851


osa-u.5
for
4338654


osa-u.5
for
4325746


zma-u.5
for
103653921


zma-u.5
for
103646027


zma-u.5
for
103636281



Ortholog ID: 695
Species vvi vvi ath gma gma bra ppo mtr mtr ghi ghi bna bna cit cit sly sly sot sot nta nta osa zma zma tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100243300 LOC100253065 AT5G19420 G93 LOC100806439 LOC103850825 LOC7496775 LOC11425815 LOC112419908 LOC121207585 LOC107938375 LOC106380801 LOC106372363 LOC102623335 LOC102612328 LOC101257851 LOC101256573 LOC102578724 LOC102600493 LOC107799299 LOC107774471 LOC4325746 LOC103653921 LOC103636281 LOC123080719 LOC123445529 LOC123401550 LOC8077365 LOC8057696 LOC100842512 LOC100834588 CHLRE_16g691050v5
Function* PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein PH/RCC1/FYVE zinc finger domain-containing protein G93 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 uncharacterized LOC102578724 uncharacterized LOC102600493 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 Putative regulator of chromosome condensation (RCC1) family protein Putative regulator of chromosome condensation (RCC1) family protein PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1-like uncharacterized LOC8077365 uncharacterized LOC8057696 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 4
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100243300 100253065 832062 100797223 100806439 103850825 7496775 11425815 112419908 121207585 107938375 106380801 106372363 102623335 102612328 101257851 101256573 102578724 102600493 107799299 107774471 4325746 103653921 103636281 123080719 123445529 123401550 8077365 8057696 100842512 100834588 66056808
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