ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-r.6	100281676	mitochondrial protein
zma-u.5	100281676	mitochondrial protein
zma-u.5	100281434	mitochondrial chaperone BCS1
zma-u.5	100273892	uncharacterized LOC100273892
sbi-r.1	8063668	AAA-ATPase At3g28600
hvu-r.1	123452371	AAA-ATPase At3g50940-like
bdi-r.1	100824372	AAA-ATPase At3g50940
ath-u.5	AT5G17760	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100788420	AAA-ATPase At3g50940
gma-u.5	100812263	AAA-ATPase At3g50940
gma-u.5	100789716	protein HYPER-SENSITIVITY-RELATED 4
sly-u.5	101265639	AAA-ATPase At3g50940-like
sly-u.5	101261461	AAA-ATPase At3g50940-like
sly-u.5	101259707	AAA-ATPase At5g17760-like
bra-r.6	108869627	AAA-ATPase At2g18193-like
bra-r.6	103874084	AAA-ATPase At2g18193
vvi-u.5	100252727	AAA-ATPase At3g50940
vvi-u.5	100854173	AAA-ATPase At3g50940
ppo-u.5	7495499	AAA-ATPase At2g18193
mtr-u.5	11411864	AAA-ATPase At3g50940
mtr-u.5	11407775	AAA-ATPase At3g50940
mtr-u.5	11407773	AAA-ATPase At3g50940
ghi-r.1	107911065	AAA-ATPase At1g43910
ghi-r.1	107909417	AAA-ATPase At5g17760
bna-r.1	106451357	protein HYPER-SENSITIVITY-RELATED 4
bna-r.1	106397457	protein HYPER-SENSITIVITY-RELATED 4
sot-r.1	102594543	protein HYPER-SENSITIVITY-RELATED 4
sot-r.1	102584520	protein HYPER-SENSITIVITY-RELATED 4-like
sot-r.1	102583264	AAA-ATPase At3g50940-like
cit-r.1	102628180	AAA-ATPase At3g50940-like
cit-r.1	102607572	AAA-ATPase At3g50940-like
nta-r.1	107795112	AAA-ATPase At3g50940-like
nta-r.1	107791011	AAA-ATPase At3g50940
nta-r.1	107790730	AAA-ATPase At3g50940
cre-r.1	CHLRE_05g234661v5	uncharacterized protein
cre-r.1	CHLRE_02g106450v5	uncharacterized protein

Top 50 coexpressed genes to 100281676 (zma-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100281676 (zma-r.6 coexpression data)

CoexMap"100281676"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(485 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2473 genes)	IEA

Protein

NP_001148068.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for NP_001148068.1)

Subcellular
localization
TargetP

other 6

(predict for NP_001148068.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100281676	zma-u.5 for 100281676	zma-u.5 for 100281434	zma-u.5 for 100273892	sbi-r.1 for 8063668	hvu-r.1 for 123452371	bdi-r.1 for 100824372	ath-u.5 for AT5G17760	gma-u.5 for 100788420	gma-u.5 for 100812263	gma-u.5 for 100789716	sly-u.5 for 101265639	sly-u.5 for 101261461	sly-u.5 for 101259707	bra-r.6 for 108869627	bra-r.6 for 103874084	vvi-u.5 for 100252727	vvi-u.5 for 100854173	ppo-u.5 for 7495499	mtr-u.5 for 11411864	mtr-u.5 for 11407775	mtr-u.5 for 11407773	ghi-r.1 for 107911065	ghi-r.1 for 107909417	bna-r.1 for 106451357	bna-r.1 for 106397457	sot-r.1 for 102594543	sot-r.1 for 102584520	sot-r.1 for 102583264	cit-r.1 for 102628180	cit-r.1 for 102607572	nta-r.1 for 107795112	nta-r.1 for 107791011	nta-r.1 for 107790730	cre-r.1 for CHLRE_05g234661v5	cre-r.1 for CHLRE_02g106450v5

Ortholog

Ortholog ID: 157

Species

zma

sbi

osa

tae

bdi

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

mitochondrial protein

mitochondrial chaperone BCS1

uncharacterized LOC8080130

AAA-ATPase At3g50940

AAA-ATPase At2g18193

probable mitochondrial chaperone BCS1-B

AAA-ATPase At3g50940

AAA-ATPase At3g50940-like

protein HYPER-SENSITIVITY-RELATED 4-like

AAA-ATPase At2g18193

AAA-ATPase At5g17760

uncharacterized LOC100241950

AAA-ATPase At3g50940

AAA-ATPase At5g17760

AAA-ATPase At3g50940

AAA-ATPase At1g43910

AAA-ATPase At3g50940

protein HYPER-SENSITIVITY-RELATED 4

AAA-ATPase At5g17760

AAA-ATPase At5g17760-like

AAA-ATPase At2g18193-like

protein HYPER-SENSITIVITY-RELATED 4-like

AAA-ATPase At3g50940-like

AAA-ATPase At3g50940

protein HYPER-SENSITIVITY-RELATED 4-like

AAA-ATPase At3g50940-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi04141	Protein processing in endoplasmic reticulum	4
sbi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5
sbi04141	Protein processing in endoplasmic reticulum	5
sbi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bdi01230	Biosynthesis of amino acids	3
bdi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	5
bdi01200	Carbon metabolism	4
bdi01230	Biosynthesis of amino acids	4
bdi00010	Glycolysis / Gluconeogenesis	3
bdi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2
bdi00100	Steroid biosynthesis	2
bdi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01040	Biosynthesis of unsaturated fatty acids	4
sly01212	Fatty acid metabolism	4
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna00790	Folate biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna00790	Folate biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	2

Expression

Expression pattern

Entrez Gene ID^*

100281676

100281434

8080130

8080132

4339775

4333339

4324105

123161367

123161357

100824372

100840525

100832286

100788270

100787726

100778503

101261461

101250191

103874084

103845903

100241950

100259595

7495497

18099250

7495496

11406855

120580616

11422577

107901206

107936550

106397457

106387745

125595180

102591847

102596396

102579261

102608161

102630983

107778321

5726192

66052449

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	tae	osa
Paralog	4	1	1	1	1	3	3	2	2	1	3	2	2	3	2	3	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100281676 (zma-r.6 coexpression data)

Top 50 enrichment test to 100281676 (zma-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**