ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-r.6	103630429	uncharacterized LOC103630429
zma-u.5	103630429	uncharacterized LOC103630429
zma-m.5	103630429	uncharacterized LOC103630429
zma-u.5	100191633	uncharacterized LOC100191633
zma-u.5	100273970	uncharacterized LOC100273970
zma-u.5	100277639	uncharacterized LOC100277639
sbi-r.1	110430582	transcriptional regulatory protein AlgP-like
sbi-r.1	8058912	uncharacterized LOC8058912
osa-u.5	4338970	uncharacterized LOC4338970
osa-u.5	4324862	uncharacterized LOC4324862
tae-r.2	123071419	uncharacterized LOC123071419
tae-r.2	123182216	synaptojanin-1
tae-r.2	123135629	synaptojanin-1
hvu-r.1	123445708	uncharacterized LOC123445708
hvu-r.1	123444890	myosin-1-like
bdi-r.1	100839804	splicing factor 1
bdi-r.1	100825188	uncharacterized LOC100825188
ath-u.5	AT3G54000	TIP41-like protein
gma-u.5	100781579	uncharacterized LOC100781579
gma-u.5	100786732	uncharacterized LOC100786732
gma-u.5	100795977	uncharacterized LOC100795977
sly-u.5	101266378	uncharacterized LOC101266378
sly-u.5	101263742	uncharacterized LOC101263742
bra-r.6	103829958	uncharacterized LOC103829958
bra-r.6	103841319	uncharacterized LOC103841319
bra-r.6	103863270	uncharacterized LOC103863270
vvi-u.5	100256408	uncharacterized LOC100256408
vvi-u.5	100254537	uncharacterized LOC100254537
ppo-u.5	7490357	uncharacterized LOC7490357
ppo-u.5	7454968	uncharacterized LOC7454968
ppo-u.5	7468840	uncharacterized LOC7468840
mtr-u.5	11410339	uncharacterized LOC11410339
mtr-u.5	11406699	uncharacterized LOC11406699
mtr-u.5	25479766	uncharacterized LOC25479766
ghi-r.1	107899009	uncharacterized LOC107899009
ghi-r.1	107898843	uncharacterized LOC107898843
ghi-r.1	107900208	uncharacterized LOC107900208
bna-r.1	125585584	uncharacterized LOC125585584
bna-r.1	106410772	uncharacterized LOC106410772
bna-r.1	106365177	uncharacterized LOC106365177
sot-r.1	102601639	uncharacterized LOC102601639
sot-r.1	102593680	uncharacterized LOC102593680
sot-r.1	102586647	uncharacterized LOC102586647
cit-r.1	102615255	uncharacterized LOC102615255
cit-r.1	102623650	uncharacterized LOC102623650
nta-r.1	107765335	uncharacterized LOC107765335
nta-r.1	107775635	uncharacterized LOC107775635
nta-r.1	107776637	uncharacterized LOC107776637

Top 50 coexpressed genes to 103630429 (zma-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103630429 (zma-r.6 coexpression data)

CoexMap"103630429"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001288443.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_001288443.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001288443.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 103630429	zma-u.5 for 103630429	zma-m.5 for 103630429	zma-u.5 for 100191633	zma-u.5 for 100273970	zma-u.5 for 100277639	sbi-r.1 for 110430582	sbi-r.1 for 8058912	osa-u.5 for 4338970	osa-u.5 for 4324862	tae-r.2 for 123071419	tae-r.2 for 123182216	tae-r.2 for 123135629	hvu-r.1 for 123445708	hvu-r.1 for 123444890	bdi-r.1 for 100839804	bdi-r.1 for 100825188	ath-u.5 for AT3G54000	gma-u.5 for 100781579	gma-u.5 for 100786732	gma-u.5 for 100795977	sly-u.5 for 101266378	sly-u.5 for 101263742	bra-r.6 for 103829958	bra-r.6 for 103841319	bra-r.6 for 103863270	vvi-u.5 for 100256408	vvi-u.5 for 100254537	ppo-u.5 for 7490357	ppo-u.5 for 7454968	ppo-u.5 for 7468840	mtr-u.5 for 11410339	mtr-u.5 for 11406699	mtr-u.5 for 25479766	ghi-r.1 for 107899009	ghi-r.1 for 107898843	ghi-r.1 for 107900208	bna-r.1 for 125585584	bna-r.1 for 106410772	bna-r.1 for 106365177	sot-r.1 for 102601639	sot-r.1 for 102593680	sot-r.1 for 102586647	cit-r.1 for 102615255	cit-r.1 for 102623650	nta-r.1 for 107765335	nta-r.1 for 107775635	nta-r.1 for 107776637

Ortholog

Ortholog ID: 1711

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC103630429

uncharacterized LOC100273970

uncharacterized LOC100277639

transcriptional regulatory protein AlgP-like

uncharacterized LOC8058912

uncharacterized LOC4338970

uncharacterized LOC4324862

uncharacterized LOC123079760

uncharacterized LOC123062600

splicing factor 1

uncharacterized LOC123445708

myosin-1-like

splicing factor 1

uncharacterized LOC100825188

TIP41-like protein

uncharacterized LOC100781579

uncharacterized LOC100786732

uncharacterized LOC100796164

uncharacterized LOC101266378

uncharacterized LOC101263742

uncharacterized LOC103829958

uncharacterized LOC103841319

uncharacterized LOC103863270

uncharacterized LOC100256408

uncharacterized LOC100254537

uncharacterized LOC7490357

uncharacterized LOC7468840

uncharacterized LOC7494465

uncharacterized LOC11406699

uncharacterized LOC25479766

uncharacterized LOC25491537

uncharacterized LOC107900208

uncharacterized LOC107948842

H/ACA ribonucleoprotein complex non-core subunit NAF1

uncharacterized LOC106410772

uncharacterized LOC106412319

uncharacterized LOC106411933

uncharacterized LOC102601639

uncharacterized LOC102593680

uncharacterized LOC102586647

uncharacterized LOC102615255

uncharacterized LOC102623650

uncharacterized LOC107765335

uncharacterized LOC107776637

uncharacterized LOC107802219

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	3
gma04517	IgSF CAM signaling	3
gma04814	Motor proteins	3
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00053	Ascorbate and aldarate metabolism	2
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly01240	Biosynthesis of cofactors	2
sly01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3
mtr00270	Cysteine and methionine metabolism	2
mtr00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	9

Expression

Expression pattern

Entrez Gene ID^*

103630429

100273970

100277639

110430582

8058912

4338970

4324862

123079760

123062600

123058558

123445708

123444890

100839804

100825188

824567

100781579

100786732

100796164

101266378

101263742

103829958

103841319

103863270

100256408

100254537

7490357

7468840

7494465

11406699

25479766

25491537

107900208

107948842

121207824

106410772

106412319

106411933

102601639

102593680

102586647

102615255

102623650

107765335

107776637

107802219

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	2	2	3	2	2	1	3	2	3	2	3	3	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103630429 (zma-r.6 coexpression data)

Top 50 enrichment test to 103630429 (zma-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**