ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107898843	uncharacterized LOC107898843
ghi-r.1	107900208	uncharacterized LOC107900208
ghi-r.1	107899009	uncharacterized LOC107899009
ghi-r.1	107941691	uncharacterized LOC107941691
ath-u.5	AT3G54000	TIP41-like protein
bra-r.6	103829958	uncharacterized LOC103829958
bra-r.6	103841319	uncharacterized LOC103841319
bra-r.6	103863270	uncharacterized LOC103863270
bna-r.1	125585584	uncharacterized LOC125585584
bna-r.1	106411933	uncharacterized LOC106411933
bna-r.1	106365177	uncharacterized LOC106365177
cit-r.1	102623650	uncharacterized LOC102623650
cit-r.1	102615255	uncharacterized LOC102615255
gma-u.5	100786732	uncharacterized LOC100786732
gma-u.5	100781579	uncharacterized LOC100781579
gma-u.5	100795977	uncharacterized LOC100795977
vvi-u.5	100256408	uncharacterized LOC100256408
vvi-u.5	100254537	uncharacterized LOC100254537
ppo-u.5	7494465	uncharacterized LOC7494465
ppo-u.5	7490357	uncharacterized LOC7490357
ppo-u.5	7454968	uncharacterized LOC7454968
mtr-u.5	11410339	uncharacterized LOC11410339
mtr-u.5	11406699	uncharacterized LOC11406699
mtr-u.5	25479766	uncharacterized LOC25479766
sly-u.5	101266378	uncharacterized LOC101266378
sly-u.5	101263742	uncharacterized LOC101263742
sot-r.1	102601639	uncharacterized LOC102601639
sot-r.1	102586647	uncharacterized LOC102586647
sot-r.1	102593680	uncharacterized LOC102593680
nta-r.1	107810232	uncharacterized LOC107810232
nta-r.1	107765335	uncharacterized LOC107765335
nta-r.1	107810532	uncharacterized LOC107810532
osa-u.5	4338970	uncharacterized LOC4338970
osa-u.5	4324862	uncharacterized LOC4324862
zma-u.5	100191633	uncharacterized LOC100191633
zma-u.5	103630429	uncharacterized LOC103630429
zma-u.5	100273970	uncharacterized LOC100273970
tae-r.2	123071419	uncharacterized LOC123071419
tae-r.2	123058558	splicing factor 1
tae-r.2	123062600	uncharacterized LOC123062600
hvu-r.1	123445708	uncharacterized LOC123445708
hvu-r.1	123444890	myosin-1-like
sbi-r.1	8058912	uncharacterized LOC8058912
sbi-r.1	110430582	transcriptional regulatory protein AlgP-like
bdi-r.1	100839804	splicing factor 1
bdi-r.1	100825188	uncharacterized LOC100825188

Top 50 coexpressed genes to 107898843 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107898843 (ghi-r.1 coexpression data)

CoexMap"107898843"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016679891.1 [sequence] [blastp]
XP_016679892.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1	(predict for XP_016679891.1)
nucl 8, cyto 1	(predict for XP_016679892.1)

Subcellular
localization
TargetP

other 9	(predict for XP_016679891.1)
other 9	(predict for XP_016679892.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107898843	ghi-r.1 for 107900208	ghi-r.1 for 107899009	ghi-r.1 for 107941691	ath-u.5 for AT3G54000	bra-r.6 for 103829958	bra-r.6 for 103841319	bra-r.6 for 103863270	bna-r.1 for 125585584	bna-r.1 for 106411933	bna-r.1 for 106365177	cit-r.1 for 102623650	cit-r.1 for 102615255	gma-u.5 for 100786732	gma-u.5 for 100781579	gma-u.5 for 100795977	vvi-u.5 for 100256408	vvi-u.5 for 100254537	ppo-u.5 for 7494465	ppo-u.5 for 7490357	ppo-u.5 for 7454968	mtr-u.5 for 11410339	mtr-u.5 for 11406699	mtr-u.5 for 25479766	sly-u.5 for 101266378	sly-u.5 for 101263742	sot-r.1 for 102601639	sot-r.1 for 102586647	sot-r.1 for 102593680	nta-r.1 for 107810232	nta-r.1 for 107765335	nta-r.1 for 107810532	osa-u.5 for 4338970	osa-u.5 for 4324862	zma-u.5 for 100191633	zma-u.5 for 103630429	zma-u.5 for 100273970	tae-r.2 for 123071419	tae-r.2 for 123058558	tae-r.2 for 123062600	hvu-r.1 for 123445708	hvu-r.1 for 123444890	sbi-r.1 for 8058912	sbi-r.1 for 110430582	bdi-r.1 for 100839804	bdi-r.1 for 100825188

Ortholog

Ortholog ID: 1711

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107900208

uncharacterized LOC107948842

H/ACA ribonucleoprotein complex non-core subunit NAF1

TIP41-like protein

uncharacterized LOC103829958

uncharacterized LOC103841319

uncharacterized LOC103863270

uncharacterized LOC106411933

uncharacterized LOC106410772

uncharacterized LOC106412319

uncharacterized LOC102623650

uncharacterized LOC102615255

uncharacterized LOC100786732

uncharacterized LOC100781579

uncharacterized LOC100796164

uncharacterized LOC100256408

uncharacterized LOC100254537

uncharacterized LOC7494465

uncharacterized LOC7490357

uncharacterized LOC7468840

uncharacterized LOC11406699

uncharacterized LOC25479766

uncharacterized LOC25491537

uncharacterized LOC101266378

uncharacterized LOC101263742

uncharacterized LOC102601639

uncharacterized LOC102586647

uncharacterized LOC102593680

uncharacterized LOC107765335

uncharacterized LOC107802219

uncharacterized LOC107776637

uncharacterized LOC4338970

uncharacterized LOC4324862

uncharacterized LOC103630429

uncharacterized LOC100273970

uncharacterized LOC100277639

splicing factor 1

uncharacterized LOC123062600

uncharacterized LOC123079760

uncharacterized LOC123445708

myosin-1-like

uncharacterized LOC8058912

transcriptional regulatory protein AlgP-like

splicing factor 1

uncharacterized LOC100825188

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	3
gma04517	IgSF CAM signaling	3
gma04814	Motor proteins	3
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3
mtr00270	Cysteine and methionine metabolism	2
mtr00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00053	Ascorbate and aldarate metabolism	2
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly01240	Biosynthesis of cofactors	2
sly01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi00562	Inositol phosphate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107900208

107948842

121207824

824567

103829958

103841319

103863270

106411933

106410772

106412319

102623650

102615255

100786732

100781579

100796164

100256408

100254537

7494465

7490357

7468840

11406699

25479766

25491537

101266378

101263742

102601639

102586647

102593680

107765335

107802219

107776637

4338970

4324862

103630429

100273970

100277639

123058558

123062600

123079760

123445708

123444890

8058912

110430582

100839804

100825188

The preparation time of this page was 0.5 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	3	3	2	3	2	3	3	2	3	3	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107898843 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107898843 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**