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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   103653200   ubiquitin carboxyl-terminal hydrolase 1 
 zma-u.5   103653200   ubiquitin carboxyl-terminal hydrolase 1 
 zma-u.5   109945734   uncharacterized LOC109945734 
 sbi-r.1   8073016   upstream activation factor subunit UAF30 
 sbi-r.1   8066852   uncharacterized LOC8066852 
 osa-u.5   107279569   uncharacterized LOC107279569 
 tae-r.2   123161431   uncharacterized LOC123161431 
 hvu-r.1   123397636   uncharacterized LOC123397636 
 bdi-r.1   112270799   uncharacterized LOC112270799 
 sly-u.5   104648289   uncharacterized LOC104648289 
 sly-u.5   104646223   uncharacterized LOC104646223 
 bra-r.6   103874035   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 vvi-u.5   109123950   transposon Tf2-1 polyprotein 
 mtr-u.5   112421302   uncharacterized LOC112421302 
 ghi-r.1   107919267   uncharacterized LOC107919267 
 bna-r.1   125587722   uncharacterized LOC125587722 
 sot-r.1   107057768   uncharacterized LOC107057768 
 cre-r.1   CHLRE_01g006250v5   uncharacterized protein 

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Top 50 coexpressed genes to 103653200 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103653200 (zma-r.6 coexpression data)

CoexMap"103653200"


zmaLOC103653200 | Entrez gene ID : 103653200    
Species zma sbi osa tae hvu bdi sly bra vvi mtr ghi bna sot cre gma cit ath ppo nta
Paralog 3 2 1 1 1 1 2 1 1 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03083 [list] [network] Polycomb repressive complex (74 genes)
GO BP
GO:0015074 [list] [network] DNA integration  (34 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (103 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (89 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
Protein XP_008678381.1 [sequence] [blastp]
XP_023158112.1 [sequence] [blastp]
XP_035823161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_008678381.1)
nucl 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_023158112.1)
cyto 6,  nucl 4  (predict for XP_035823161.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_008678381.1)
other 5,  mito 3  (predict for XP_023158112.1)
other 7  (predict for XP_035823161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
103653200
zma-u.5
for
103653200
zma-u.5
for
109945734
sbi-r.1
for
8073016
sbi-r.1
for
8066852
osa-u.5
for
107279569
tae-r.2
for
123161431
hvu-r.1
for
123397636
bdi-r.1
for
112270799
sly-u.5
for
104648289
sly-u.5
for
104646223
bra-r.6
for
103874035
vvi-u.5
for
109123950
mtr-u.5
for
112421302
ghi-r.1
for
107919267
bna-r.1
for
125587722
sot-r.1
for
107057768
cre-r.1
for
CHLRE_01g006250v5


Ortholog ID: 28
Species zma zma tae tae hvu bdi sly sly mtr ghi ghi bna cre
Symbol LOC103629078 LOC103644420 LOC123092995 LOC123110149 LOC123397636 LOC106866556 LOC104648289 LOC104646223 LOC25490520 LOC121219094 LOC107945524 LOC125587722 CHLRE_01g006250v5
Function* uncharacterized LOC103629078 uncharacterized LOC103644420 uncharacterized LOC123092995 beta-carotene isomerase D27, chloroplastic uncharacterized LOC123397636 uncharacterized LOC106866556 uncharacterized LOC104648289 uncharacterized LOC104646223 putative protein FAR1-RELATED SEQUENCE 10 uncharacterized LOC121219094 uncharacterized LOC107945524 uncharacterized LOC125587722 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103629078 103644420 123092995 123110149 123397636 106866556 104648289 104646223 25490520 121219094 107945524 125587722 66051930
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