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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  103653200  ubiquitin carboxyl-terminal hydrolase 1 
 zma-r.6  103653200  ubiquitin carboxyl-terminal hydrolase 1 
 zma-u.5  109945734  uncharacterized LOC109945734 
 osa-u.5  107279569  uncharacterized LOC107279569 
 sly-u.5  104648289  uncharacterized LOC104648289 
 sly-u.5  104646223  uncharacterized LOC104646223 
 vvi-u.5  109123950  transposon Tf2-1 polyprotein 
 mtr-u.5  112421302  uncharacterized LOC112421302 

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Top 50 coexpressed genes to 103653200 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103653200 (zma-u.5 coexpression data)

CoexMap"103653200"


zmaLOC103653200 | Entrez gene ID : 103653200
Species zma osa sly vvi mtr sot hvu ath tae cit sbi ppo gma ghi cre bna nta bdi bra
Paralog 3 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03083 [list] [network] Polycomb repressive complex (74 genes)
GO BP
GO:0015074 [list] [network] DNA integration  (34 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (103 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (89 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
Protein XP_008678381.1 [sequence] [blastp]
XP_023158112.1 [sequence] [blastp]
XP_035823161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_008678381.1)
nucl 8,  cyto 1,  mito 1,  vacu 1  (predict for XP_023158112.1)
cyto 6,  nucl 4  (predict for XP_035823161.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_008678381.1)
other 5,  mito 3  (predict for XP_023158112.1)
other 7  (predict for XP_035823161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
103653200

.

zma-r.6
for
103653200

.

zma-u.5
for
109945734

.

osa-u.5
for
107279569

.

sly-u.5
for
104648289

.

sly-u.5
for
104646223

.

vvi-u.5
for
109123950

.

mtr-u.5
for
112421302

.


Ortholog ID: 28
Species sly zma tae tae hvu ghi ghi bna cre bdi
Symbol LOC104646223 LOC103644420 LOC123092995 LOC123110149 LOC123397636 LOC121219094 LOC107945524 LOC125587722 CHLRE_01g006250v5 LOC106866556
Function* uncharacterized LOC104646223 uncharacterized LOC103644420 uncharacterized LOC123092995 beta-carotene isomerase D27, chloroplastic uncharacterized LOC123397636 uncharacterized LOC121219094 uncharacterized LOC107945524 uncharacterized LOC125587722 uncharacterized protein uncharacterized LOC106866556
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104646223 103644420 123092995 123110149 123397636 121219094 107945524 125587722 66051930 106866556
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