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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   aoc1   allene-oxide cyclase1 
 zma-u.5   aoc1   allene-oxide cyclase1 
 zma-m.5   aoc1   allene-oxide cyclase1 
 zma-u.5   aoc2   allene-oxide cyclase2 
 sbi-r.1   8063218   allene oxide cyclase, chloroplastic 
 osa-u.5   4333201   allene oxide cyclase, chloroplastic-like 
 tae-r.2   123145716   allene oxide cyclase, chloroplastic 
 tae-r.2   123138464   allene oxide cyclase, chloroplastic 
 tae-r.2   123128593   allene oxide cyclase, chloroplastic 
 hvu-r.1   123403633   allene oxide cyclase, chloroplastic-like 
 bdi-r.1   100829167   allene oxide cyclase, chloroplastic 
 ath-u.5   AOC1   allene oxide cyclase 1 
 ath-u.5   AOC2   allene oxide cyclase 2 
 ath-u.5   AOC3   allene oxide cyclase 3 
 gma-u.5   AOC3   amine oxidase, copper containing 3 (vascular adhesion protein 1) 
 gma-u.5   AOC4   allene oxide cyclase 3, chloroplastic-like 
 gma-u.5   AOC5   allene oxide cyclase 5 
 sly-u.5   AOC   allene oxide cyclase 
 bra-r.6   103839361   allene oxide cyclase 3, chloroplastic 
 bra-r.6   103839364   allene oxide cyclase 2, chloroplastic 
 bra-r.6   103875352   allene oxide cyclase 2, chloroplastic 
 vvi-u.5   100232990   allene oxide cyclase 
 ppo-u.5   7494544   allene oxide cyclase, chloroplastic 
 mtr-u.5   25499834   allene oxide cyclase, chloroplastic 
 mtr-u.5   11433162   allene oxide cyclase, chloroplastic 
 ghi-r.1   107946443   allene oxide cyclase 4, chloroplastic 
 ghi-r.1   107916790   allene oxide cyclase, chloroplastic 
 ghi-r.1   107916775   allene oxide cyclase, chloroplastic 
 bna-r.1   125577176   allene oxide cyclase 4, chloroplastic-like 
 bna-r.1   125589999   allene oxide cyclase 2, chloroplastic-like 
 bna-r.1   106350927   allene oxide cyclase 3, chloroplastic-like 
 sot-r.1   102577822   allene oxide cyclase 
 cit-r.1   102622874   allene oxide cyclase, chloroplastic 
 cit-r.1   102622584   allene oxide cyclase, chloroplastic-like 
 nta-r.1   107768393   allene oxide cyclase 4, chloroplastic-like 
 nta-r.1   107767576   allene oxide cyclase, chloroplastic 
 cre-r.1   CHLRE_01g045200v5   uncharacterized protein 

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Top 50 coexpressed genes to aoc1 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to aoc1 (zma-r.6 coexpression data)

CoexMap"542151"


zmaaoc1 | Entrez gene ID : 542151      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 1 1 3 3 1 3 1 1 2 3 3 1 2 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00592 [list] [network] alpha-Linolenic acid metabolism (52 genes)
GO BP
GO:0009695 [list] [network] jasmonic acid biosynthetic process  (4 genes)  IEA  
GO CC
GO MF
GO:0046423 [list] [network] allene-oxide cyclase activity  (2 genes)  IEA  
Protein NP_001105245.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001105245.1)
Subcellular
localization
TargetP
chlo 8,  mito 5  (predict for NP_001105245.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
aoc1
zma-u.5
for
aoc1
zma-m.5
for
aoc1
zma-u.5
for
aoc2
sbi-r.1
for
8063218
osa-u.5
for
4333201
tae-r.2
for
123145716
tae-r.2
for
123138464
tae-r.2
for
123128593
hvu-r.1
for
123403633
bdi-r.1
for
100829167
ath-u.5
for
AOC1
ath-u.5
for
AOC2
ath-u.5
for
AOC3
gma-u.5
for
AOC3
gma-u.5
for
AOC4
gma-u.5
for
AOC5
sly-u.5
for
AOC
bra-r.6
for
103839361
bra-r.6
for
103839364
bra-r.6
for
103875352
vvi-u.5
for
100232990
ppo-u.5
for
7494544
mtr-u.5
for
25499834
mtr-u.5
for
11433162
ghi-r.1
for
107946443
ghi-r.1
for
107916790
ghi-r.1
for
107916775
bna-r.1
for
125577176
bna-r.1
for
125589999
bna-r.1
for
106350927
sot-r.1
for
102577822
cit-r.1
for
102622874
cit-r.1
for
102622584
nta-r.1
for
107768393
nta-r.1
for
107767576
cre-r.1
for
CHLRE_01g045200v5


Ortholog ID: 2342
Species zma zma sbi osa tae tae tae hvu bdi ath ath ath gma gma gma sly bra bra vvi ppo mtr mtr ghi ghi ghi bna bna bna sot cit cit nta nta cre
Symbol aoc1 aoc2 LOC8063218 LOC4333201 LOC123145716 LOC123138464 LOC123128593 LOC123403633 LOC100829167 AOC1 AOC2 AOC4 AOC4 LOC100800036 AOC6 AOC LOC103839361 LOC103875352 LOC100232990 LOC7494544 LOC25495598 LOC25495597 LOC121202816 LOC121204899 LOC121220211 LOC106352449 LOC106416449 LOC106443552 LOC102577822 LOC102622874 LOC102622584 LOC107768393 LOC107767576 CHLRE_01g045200v5
Function* allene-oxide cyclase1 allene-oxide cyclase2 allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic-like allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic-like allene oxide cyclase, chloroplastic allene oxide cyclase 1 allene oxide cyclase 2 allene oxide cyclase 4 allene oxide cyclase 3, chloroplastic-like allene oxide cyclase 4, chloroplastic-like allene oxide cyclase 4, chloroplastic-like allene oxide cyclase allene oxide cyclase 3, chloroplastic allene oxide cyclase 2, chloroplastic allene oxide cyclase allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase 2, chloroplastic allene oxide cyclase 2, chloroplastic allene oxide cyclase 2, chloroplastic allene oxide cyclase allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic-like allene oxide cyclase 4, chloroplastic-like allene oxide cyclase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 12
zma00270 Cysteine and methionine metabolism 8
zma00670 One carbon pool by folate 5
zma01240 Biosynthesis of cofactors 5
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
zma00670 One carbon pool by folate 2
zma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 4
sbi00591 Linoleic acid metabolism 4
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa00592 alpha-Linolenic acid metabolism 4
osa00591 Linoleic acid metabolism 2
osa00564 Glycerophospholipid metabolism 2
osa00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 10
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 12
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 12
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 4
hvu01240 Biosynthesis of cofactors 3
hvu00040 Pentose and glucuronate interconversions 2
hvu00053 Ascorbate and aldarate metabolism 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00670 One carbon pool by folate 3
bdi00190 Oxidative phosphorylation 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 3
ath00052 Galactose metabolism 2
ath00230 Purine metabolism 2
ath00480 Glutathione metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04075 Plant hormone signal transduction 3
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
gma00620 Pyruvate metabolism 3
gma00592 alpha-Linolenic acid metabolism 2
gma00040 Pentose and glucuronate interconversions 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00592 alpha-Linolenic acid metabolism 4
gma04075 Plant hormone signal transduction 3
gma00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 6
bra00592 alpha-Linolenic acid metabolism 5
bra00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 4
ppo04075 Plant hormone signal transduction 4
ppo00410 beta-Alanine metabolism 2
ppo01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 8
bna00941 Flavonoid biosynthesis 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 8
bna00941 Flavonoid biosynthesis 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 8
bna04075 Plant hormone signal transduction 4
bna00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00592 alpha-Linolenic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 5
cit01230 Biosynthesis of amino acids 3
cit04075 Plant hormone signal transduction 2
cit00010 Glycolysis / Gluconeogenesis 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00592 alpha-Linolenic acid metabolism 3
cit04075 Plant hormone signal transduction 3
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
nta04075 Plant hormone signal transduction 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00592 alpha-Linolenic acid metabolism 4
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542151 100273356 8063218 4333201 123145716 123138464 123128593 123403633 100829167 822167 822168 837888 100803666 100800036 100805194 544306 103839361 103875352 100232990 7494544 25495598 25495597 121202816 121204899 121220211 106352449 106416449 106443552 102577822 102622874 102622584 107768393 107767576 5715654
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