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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   732793   bundle sheath defective 2 
 zma-u.5   732793   bundle sheath defective 2 
 sbi-r.1   8068178   uncharacterized LOC8068178 
 osa-u.5   4340929   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123147846   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123161590   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123169427   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 hvu-r.1   123412214   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bdi-r.1   100836490   uncharacterized LOC100836490 
 ath-u.5   AT3G47650   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 gma-u.5   100808293   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 gma-u.5   100500330   uncharacterized LOC100500330 
 gma-u.5   100306315   uncharacterized LOC100306315 
 sly-u.5   101257241   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bra-r.6   103873575   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bra-r.6   103873219   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 vvi-u.5   100854903   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ppo-u.5   18107674   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ppo-u.5   7462985   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 mtr-u.5   11439220   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107962897   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107962620   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107943215   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   111215524   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   106350229   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 bna-r.1   106425472   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 sot-r.1   102600333   uncharacterized LOC102600333 
 cit-r.1   102627939   hypothetical protein 
 cit-r.1   102618635   hypothetical protein 
 nta-r.1   142162842   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 nta-r.1   107784072   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 nta-r.1   107784071   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 

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Top 50 coexpressed genes to 732793 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 732793 (zma-r.6 coexpression data)

CoexMap"732793"


zmaLOC732793 | Entrez gene ID : 732793      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 1 1 1 3 1 2 1 2 1 3 3 1 2 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0101031 [list] [network] protein folding chaperone complex  (3 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (118 genes)  IEA  
GO MF
GO:0044183 [list] [network] protein folding chaperone  (107 genes)  IEA  
Protein NP_001105880.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_001105880.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001105880.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
732793
zma-u.5
for
732793
sbi-r.1
for
8068178
osa-u.5
for
4340929
tae-r.2
for
123147846
tae-r.2
for
123161590
tae-r.2
for
123169427
hvu-r.1
for
123412214
bdi-r.1
for
100836490
ath-u.5
for
AT3G47650
gma-u.5
for
100808293
gma-u.5
for
100500330
gma-u.5
for
100306315
sly-u.5
for
101257241
bra-r.6
for
103873575
bra-r.6
for
103873219
vvi-u.5
for
100854903
ppo-u.5
for
18107674
ppo-u.5
for
7462985
mtr-u.5
for
11439220
ghi-r.1
for
107962897
ghi-r.1
for
107962620
ghi-r.1
for
107943215
bna-r.1
for
111215524
bna-r.1
for
106350229
bna-r.1
for
106425472
sot-r.1
for
102600333
cit-r.1
for
102627939
cit-r.1
for
102618635
nta-r.1
for
142162842
nta-r.1
for
107784072
nta-r.1
for
107784071


Ortholog ID: 4401
Species zma sbi osa tae tae tae hvu bdi ath gma gma gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit cit nta nta nta
Symbol LOC732793 LOC8068178 LOC4340929 LOC123147846 LOC123161590 LOC123169427 LOC123412214 LOC100836490 AT3G47650 LOC100808293 LOC100500330 LOC100788324 LOC101257241 LOC103873575 LOC103873219 LOC100854903 LOC18107674 LOC7462985 LOC11439220 LOC107962897 LOC107943215 LOC107942472 LOC106425472 BNAA01G20230D LOC106347609 LOC102600333 LOC102627939 LOC102618635 LOC142162842 LOC107784072 LOC107784071
Function* bundle sheath defective 2 uncharacterized LOC8068178 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic uncharacterized LOC100836490 DnaJ/Hsp40 cysteine-rich domain superfamily protein protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic uncharacterized LOC100500330 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic uncharacterized LOC102600333 hypothetical protein hypothetical protein protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra01200 Carbon metabolism 2
bra00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00195 Photosynthesis 3
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 732793 8068178 4340929 123147846 123161590 123169427 123412214 100836490 823919 100808293 100500330 100788324 101257241 103873575 103873219 100854903 18107674 7462985 11439220 107962897 107943215 107942472 106425472 106416172 106347609 102600333 102627939 102618635 142162842 107784072 107784071
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