ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100192580	uncharacterized LOC100192580
zma-r.6	100192580	uncharacterized LOC100192580
sbi-r.1	8056610	eukaryotic translation initiation factor 3 subunit G
sbi-r.1	8063241	eukaryotic translation initiation factor 3 subunit G
sbi-r.1	8066118	eukaryotic translation initiation factor 3 subunit G
osa-u.5	4330963	uncharacterized LOC4330963
tae-r.2	123082301	eukaryotic translation initiation factor 3 subunit G
tae-r.2	123128697	eukaryotic translation initiation factor 3 subunit G
tae-r.2	123145827	eukaryotic translation initiation factor 3 subunit G
hvu-r.1	123451101	eukaryotic translation initiation factor 3 subunit G-like
hvu-r.1	123406209	eukaryotic translation initiation factor 3 subunit G
bdi-r.1	100845086	eukaryotic translation initiation factor 3 subunit G
ath-u.5	EIF3G1	eukaryotic translation initiation factor 3G1
ath-u.5	EIF3G2	eukaryotic translation initiation factor 3G2
gma-u.5	100776807	eukaryotic translation initiation factor 3 subunit G
gma-u.5	100818725	eukaryotic translation initiation factor 3 subunit G
sly-u.5	101263343	uncharacterized LOC101263343
bra-r.6	103859388	eukaryotic translation initiation factor 3 subunit G
bra-r.6	103870353	eukaryotic translation initiation factor 3 subunit G
bra-r.6	103846949	eukaryotic translation initiation factor 3 subunit G
vvi-u.5	100242668	uncharacterized LOC100242668
vvi-u.5	100251333	uncharacterized LOC100251333
vvi-u.5	100265545	uncharacterized LOC100265545
ppo-u.5	7458120	uncharacterized LOC7458120
ppo-u.5	7494459	uncharacterized LOC7494459
mtr-u.5	25500933	eukaryotic translation initiation factor 3 subunit G-A
mtr-u.5	11407595	eukaryotic translation initiation factor 3 subunit G
ghi-r.1	107962033	eukaryotic translation initiation factor 3 subunit G
bna-r.1	106352313	eukaryotic translation initiation factor 3 subunit G
bna-r.1	106433254	eukaryotic translation initiation factor 3 subunit G-like
bna-r.1	106353049	eukaryotic translation initiation factor 3 subunit G
sot-r.1	102606183	eukaryotic translation initiation factor 3 subunit G-like
cit-r.1	102611620	uncharacterized LOC102611620
nta-r.1	107805884	uncharacterized LOC107805884
nta-r.1	107829260	uncharacterized LOC107829260
cre-r.1	CHLRE_06g269450v5	uncharacterized protein

Top 50 coexpressed genes to 100192580 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100192580 (zma-u.5 coexpression data)

CoexMap"100192580"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex	(35 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5465 genes)	IEA

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(86 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1549 genes)	IEA

Protein

NP_001131267.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, cyto 1, mito 1, cysk_nucl 1, nucl_plas 1

(predict for NP_001131267.1)

Subcellular
localization
TargetP

other 9

(predict for NP_001131267.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100192580	zma-r.6 for 100192580	sbi-r.1 for 8056610	sbi-r.1 for 8063241	sbi-r.1 for 8066118	osa-u.5 for 4330963	tae-r.2 for 123082301	tae-r.2 for 123128697	tae-r.2 for 123145827	hvu-r.1 for 123451101	hvu-r.1 for 123406209	bdi-r.1 for 100845086	ath-u.5 for EIF3G1	ath-u.5 for EIF3G2	gma-u.5 for 100776807	gma-u.5 for 100818725	sly-u.5 for 101263343	bra-r.6 for 103859388	bra-r.6 for 103870353	bra-r.6 for 103846949	vvi-u.5 for 100242668	vvi-u.5 for 100251333	vvi-u.5 for 100265545	ppo-u.5 for 7458120	ppo-u.5 for 7494459	mtr-u.5 for 25500933	mtr-u.5 for 11407595	ghi-r.1 for 107962033	bna-r.1 for 106352313	bna-r.1 for 106433254	bna-r.1 for 106353049	sot-r.1 for 102606183	cit-r.1 for 102611620	nta-r.1 for 107805884	nta-r.1 for 107829260	cre-r.1 for CHLRE_06g269450v5

Ortholog

Ortholog ID: 2810

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

EIF3G1

EIF3G2

Function^*

uncharacterized LOC100192580

eukaryotic translation initiation factor 3 subunit G

uncharacterized LOC4330963

eukaryotic translation initiation factor 3 subunit G

eukaryotic translation initiation factor 3 subunit G-like

eukaryotic translation initiation factor 3 subunit G

eukaryotic translation initiation factor 3G1

eukaryotic translation initiation factor 3G2

eukaryotic translation initiation factor 3 subunit G

uncharacterized LOC101263343

eukaryotic translation initiation factor 3 subunit G

uncharacterized LOC100242668

uncharacterized LOC100251333

uncharacterized LOC100265545

uncharacterized LOC7458120

uncharacterized LOC7494459

eukaryotic translation initiation factor 3 subunit G-A

eukaryotic translation initiation factor 3 subunit G

eukaryotic translation initiation factor 3 subunit G-like

uncharacterized LOC102611620

uncharacterized LOC107805884

uncharacterized LOC107829260

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11
zma03050	Proteasome	3
zma03008	Ribosome biogenesis in eukaryotes	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	10
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	12
bdi03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	5
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra03083	Polycomb repressive complex	3
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi03040	Spliceosome	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	10
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	10
ppo03013	Nucleocytoplasmic transport	2
ppo03015	mRNA surveillance pathway	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	6
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

Expression

Expression pattern

Entrez Gene ID^*

100192580

8056610

8063241

4330963

123082301

123145827

123138889

123451101

123406209

100845086

820313

830487

100776807

100818725

101263343

103870353

103846949

103846976

100242668

100251333

100265545

7458120

7494459

25500933

11407595

107900461

111215748

106418982

106452533

102606183

102611620

107805884

107829260

5721874

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	1	3	2	1	2	2	1	3	3	2	2	1	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100192580 (zma-u.5 coexpression data)

Top 50 enrichment test to 100192580 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**