ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107829260	uncharacterized LOC107829260
nta-r.1	107805884	uncharacterized LOC107805884
sly-u.5	101263343	uncharacterized LOC101263343
sot-r.1	102606183	eukaryotic translation initiation factor 3 subunit G-like
ath-u.5	EIF3G1	eukaryotic translation initiation factor 3G1
ath-u.5	EIF3G2	eukaryotic translation initiation factor 3G2
gma-u.5	100776807	eukaryotic translation initiation factor 3 subunit G
gma-u.5	100818725	eukaryotic translation initiation factor 3 subunit G
bra-r.6	103846949	eukaryotic translation initiation factor 3 subunit G
bra-r.6	103846976	eukaryotic translation initiation factor 3 subunit G
bra-r.6	103859388	eukaryotic translation initiation factor 3 subunit G
vvi-u.5	100242668	uncharacterized LOC100242668
vvi-u.5	100251333	uncharacterized LOC100251333
vvi-u.5	100265545	uncharacterized LOC100265545
ppo-u.5	7494459	uncharacterized LOC7494459
ppo-u.5	7458120	uncharacterized LOC7458120
mtr-u.5	25500933	eukaryotic translation initiation factor 3 subunit G-A
mtr-u.5	11407595	eukaryotic translation initiation factor 3 subunit G
ghi-r.1	107943593	eukaryotic translation initiation factor 3 subunit G
ghi-r.1	107950247	eukaryotic translation initiation factor 3 subunit G
ghi-r.1	107950321	eukaryotic translation initiation factor 3 subunit G
bna-r.1	106452533	eukaryotic translation initiation factor 3 subunit G
bna-r.1	111215748	eukaryotic translation initiation factor 3 subunit G
bna-r.1	106352313	eukaryotic translation initiation factor 3 subunit G
cit-r.1	102611620	uncharacterized LOC102611620
osa-u.5	4330963	uncharacterized LOC4330963
zma-u.5	100192580	uncharacterized LOC100192580
tae-r.2	123082301	eukaryotic translation initiation factor 3 subunit G
tae-r.2	123094422	eukaryotic translation initiation factor 3 subunit G
tae-r.2	123096031	eukaryotic translation initiation factor 3 subunit G
hvu-r.1	123406209	eukaryotic translation initiation factor 3 subunit G
hvu-r.1	123451101	eukaryotic translation initiation factor 3 subunit G-like
sbi-r.1	8066118	eukaryotic translation initiation factor 3 subunit G
sbi-r.1	8063241	eukaryotic translation initiation factor 3 subunit G
bdi-r.1	100845086	eukaryotic translation initiation factor 3 subunit G
cre-r.1	CHLRE_06g269450v5	uncharacterized protein

Top 50 coexpressed genes to 107829260 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107829260 (nta-r.1 coexpression data)

CoexMap"107829260"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex	(39 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(8458 genes)	IEA

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(138 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2607 genes)	IEA

Protein

XP_016512219.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, mito 3, chlo_mito 3, cyto 2

(predict for XP_016512219.1)

Subcellular
localization
TargetP

other 9

(predict for XP_016512219.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107829260	nta-r.1 for 107805884	sly-u.5 for 101263343	sot-r.1 for 102606183	ath-u.5 for EIF3G1	ath-u.5 for EIF3G2	gma-u.5 for 100776807	gma-u.5 for 100818725	bra-r.6 for 103846949	bra-r.6 for 103846976	bra-r.6 for 103859388	vvi-u.5 for 100242668	vvi-u.5 for 100251333	vvi-u.5 for 100265545	ppo-u.5 for 7494459	ppo-u.5 for 7458120	mtr-u.5 for 25500933	mtr-u.5 for 11407595	ghi-r.1 for 107943593	ghi-r.1 for 107950247	ghi-r.1 for 107950321	bna-r.1 for 106452533	bna-r.1 for 111215748	bna-r.1 for 106352313	cit-r.1 for 102611620	osa-u.5 for 4330963	zma-u.5 for 100192580	tae-r.2 for 123082301	tae-r.2 for 123094422	tae-r.2 for 123096031	hvu-r.1 for 123406209	hvu-r.1 for 123451101	sbi-r.1 for 8066118	sbi-r.1 for 8063241	bdi-r.1 for 100845086	cre-r.1 for CHLRE_06g269450v5

Ortholog

Ortholog ID: 2810

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

EIF3G1

EIF3G2

Function^*

uncharacterized LOC107829260

uncharacterized LOC107805884

uncharacterized LOC101263343

eukaryotic translation initiation factor 3 subunit G-like

eukaryotic translation initiation factor 3G1

eukaryotic translation initiation factor 3G2

eukaryotic translation initiation factor 3 subunit G

uncharacterized LOC100242668

uncharacterized LOC100251333

uncharacterized LOC100265545

uncharacterized LOC7494459

uncharacterized LOC7458120

eukaryotic translation initiation factor 3 subunit G-A

eukaryotic translation initiation factor 3 subunit G

uncharacterized LOC102611620

uncharacterized LOC4330963

uncharacterized LOC100192580

eukaryotic translation initiation factor 3 subunit G

eukaryotic translation initiation factor 3 subunit G-like

eukaryotic translation initiation factor 3 subunit G

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	5
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra03083	Polycomb repressive complex	3
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi03040	Spliceosome	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	10
ppo03013	Nucleocytoplasmic transport	2
ppo03015	mRNA surveillance pathway	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	10
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	6
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11
zma03050	Proteasome	3
zma03008	Ribosome biogenesis in eukaryotes	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	10
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	12
bdi03013	Nucleocytoplasmic transport	5

Expression

Expression pattern

Entrez Gene ID^*

107829260

107805884

101263343

102606183

820313

830487

100776807

100818725

103846949

103846976

103870353

100242668

100251333

100265545

7494459

7458120

25500933

11407595

107900461

106452533

111215748

106418982

102611620

4330963

100192580

123082301

123138889

123145827

123406209

123451101

8063241

8056610

100845086

5721874

The preparation time of this page was 0.2 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	2	3	3	2	2	3	3	1	1	1	3	2	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107829260 (nta-r.1 coexpression data)

Top 50 enrichment test to 107829260 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**