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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100274181   uncharacterized LOC100274181 
 zma-r.6   100274181   uncharacterized LOC100274181 
 zma-m.5   100274181   uncharacterized LOC100274181 
 zma-u.5   100274004   uncharacterized LOC100274004 
 sbi-r.1   8066195   pre-mRNA-processing ATP-dependent RNA helicase prp5 
 osa-u.5   4348955   uncharacterized LOC4348955 
 tae-r.2   123052341   uncharacterized protein DDB_G0286299 
 tae-r.2   123085196   peptidyl-prolyl cis-trans isomerase G 
 tae-r.2   123092801   nuclear speckle splicing regulatory protein 1 
 hvu-r.1   123425626   uncharacterized protein DDB_G0286299-like 
 hvu-r.1   123449180   nuclear speckle splicing regulatory protein 1-like 
 bdi-r.1   100836225   dentin matrix acidic phosphoprotein 1 
 ath-u.5   AT3G56720   pre-mRNA-splicing factor 
 gma-u.5   100806966   arginine/serine-rich coiled-coil protein 2 
 gma-u.5   100798812   arginine/serine-rich coiled-coil protein 2 
 sly-u.5   101247793   uncharacterized LOC101247793 
 bra-r.6   103841571   arginine/serine-rich coiled-coil protein 2 
 vvi-u.5   100257160   uncharacterized LOC100257160 
 ppo-u.5   7496082   uncharacterized LOC7496082 
 ppo-u.5   7464095   uncharacterized LOC7464095 
 mtr-u.5   11424300   arginine/serine-rich coiled-coil protein 2 
 ghi-r.1   107891362   arginine/serine-rich coiled-coil protein 2 
 ghi-r.1   107889376   arginine/serine-rich coiled-coil protein 2 
 bna-r.1   125591147   arginine/serine-rich coiled-coil protein 2-like 
 sot-r.1   102597853   arginine/serine-rich coiled-coil protein 2 
 cit-r.1   102613974   uncharacterized LOC102613974 
 nta-r.1   107796830   uncharacterized LOC107796830 
 nta-r.1   107771131   uncharacterized LOC107771131 

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Top 50 coexpressed genes to 100274181 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100274181 (zma-u.5 coexpression data)

CoexMap"100274181"


zmaLOC100274181 | Entrez gene ID : 100274181      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 2 1 1 2 1 1 1 2 1 2 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001142027.1 [sequence] [blastp]
XP_008681536.1 [sequence] [blastp]
XP_008681538.1 [sequence] [blastp]
XP_020408769.1 [sequence] [blastp]
XP_035823726.1 [sequence] [blastp]
XP_035823727.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001142027.1)
nucl 5,  chlo 1,  plas 1,  golg 1,  golg_plas 1  (predict for XP_008681536.1)
nucl 9  (predict for XP_008681538.1)
nucl 9  (predict for XP_020408769.1)
nucl 5,  chlo 1,  plas 1,  golg 1,  golg_plas 1  (predict for XP_035823726.1)
nucl 9  (predict for XP_035823727.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001142027.1)
other 8,  mito 4  (predict for XP_008681536.1)
other 8,  mito 4  (predict for XP_008681538.1)
other 8,  mito 4  (predict for XP_020408769.1)
other 8,  mito 4  (predict for XP_035823726.1)
other 8,  mito 4  (predict for XP_035823727.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100274181
zma-r.6
for
100274181
zma-m.5
for
100274181
zma-u.5
for
100274004
sbi-r.1
for
8066195
osa-u.5
for
4348955
tae-r.2
for
123052341
tae-r.2
for
123085196
tae-r.2
for
123092801
hvu-r.1
for
123425626
hvu-r.1
for
123449180
bdi-r.1
for
100836225
ath-u.5
for
AT3G56720
gma-u.5
for
100806966
gma-u.5
for
100798812
sly-u.5
for
101247793
bra-r.6
for
103841571
vvi-u.5
for
100257160
ppo-u.5
for
7496082
ppo-u.5
for
7464095
mtr-u.5
for
11424300
ghi-r.1
for
107891362
ghi-r.1
for
107889376
bna-r.1
for
125591147
sot-r.1
for
102597853
cit-r.1
for
102613974
nta-r.1
for
107796830
nta-r.1
for
107771131


Ortholog ID: 7627
Species zma zma sbi osa tae tae tae hvu hvu bdi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna sot cit nta nta
Symbol LOC100274181 LOC100274004 LOC8066195 LOC4348955 LOC123052341 LOC123092801 LOC123044481 LOC123425626 LOC123449180 LOC100836225 AT3G56720 LOC100806966 LOC100798812 LOC101247793 LOC103841571 LOC100257160 LOC7496082 LOC7464095 LOC11424300 LOC107891362 LOC107889376 LOC125591147 LOC102597853 LOC102613974 LOC107796830 LOC107771131
Function* uncharacterized LOC100274181 uncharacterized LOC100274004 pre-mRNA-processing ATP-dependent RNA helicase prp5 uncharacterized LOC4348955 uncharacterized protein DDB_G0286299 nuclear speckle splicing regulatory protein 1 uncharacterized LOC123044481 uncharacterized protein DDB_G0286299-like nuclear speckle splicing regulatory protein 1-like dentin matrix acidic phosphoprotein 1 pre-mRNA-splicing factor arginine/serine-rich coiled-coil protein 2 arginine/serine-rich coiled-coil protein 2 uncharacterized LOC101247793 arginine/serine-rich coiled-coil protein 2 uncharacterized LOC100257160 uncharacterized LOC7496082 uncharacterized LOC7464095 arginine/serine-rich coiled-coil protein 2 arginine/serine-rich coiled-coil protein 2 arginine/serine-rich coiled-coil protein 2 arginine/serine-rich coiled-coil protein 2-like arginine/serine-rich coiled-coil protein 2 uncharacterized LOC102613974 uncharacterized LOC107796830 uncharacterized LOC107771131
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100274181 100274004 8066195 4348955 123052341 123092801 123044481 123425626 123449180 100836225 824839 100806966 100798812 101247793 103841571 100257160 7496082 7464095 11424300 107891362 107889376 125591147 102597853 102613974 107796830 107771131
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