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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100282152   uncharacterized LOC100282152 
 zma-r.6   100282152   uncharacterized LOC100282152 
 zma-m.5   100282152   uncharacterized LOC100282152 
 sbi-r.1   8071932   uncharacterized LOC8071932 
 osa-u.5   4350746   uncharacterized LOC4350746 
 tae-r.2   123187537   THUMP domain-containing protein 1 homolog 
 tae-r.2   123051602   uncharacterized LOC123051602 
 tae-r.2   123043742   uncharacterized LOC123043742 
 hvu-r.1   123424762   translation initiation factor IF-2 
 bdi-r.1   100835461   uncharacterized LOC100835461 
 ath-u.5   AT5G12410   THUMP domain-containing protein 
 gma-u.5   100812892   uncharacterized LOC100812892 
 gma-u.5   100776466   THUMP domain-containing protein 1 homolog 
 sly-u.5   101265890   uncharacterized LOC101265890 
 bra-r.6   103855976   THUMP domain-containing protein 1 
 bra-r.6   103846640   THUMP domain-containing protein 1 
 vvi-u.5   100244787   uncharacterized LOC100244787 
 ppo-u.5   7467981   uncharacterized LOC7467981 
 ppo-u.5   7467389   uncharacterized LOC7467389 
 mtr-u.5   11436214   THUMP domain-containing protein 1 homolog 
 ghi-r.1   107891433   THUMP domain-containing protein 1 
 ghi-r.1   107889304   THUMP domain-containing protein 1 
 bna-r.1   106419840   THUMP domain-containing protein 1 
 bna-r.1   106372367   THUMP domain-containing protein 1 
 bna-r.1   106424592   YTH domain-containing protein 1 
 sot-r.1   102579706   THUMP domain-containing protein 1 homolog 
 cit-r.1   102627041   uncharacterized LOC102627041 
 nta-r.1   107777364   uncharacterized LOC107777364 
 nta-r.1   107782019   uncharacterized LOC107782019 
 cre-r.1   CHLRE_14g629550v5   uncharacterized protein 

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Top 50 coexpressed genes to 100282152 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100282152 (zma-u.5 coexpression data)

CoexMap"100282152"


zmaLOC100282152 | Entrez gene ID : 100282152      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 2 1 2 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006400 [list] [network] tRNA modification  (84 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001355869.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  chlo 3,  nucl 3  (predict for NP_001355869.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_001355869.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100282152
zma-r.6
for
100282152
zma-m.5
for
100282152
sbi-r.1
for
8071932
osa-u.5
for
4350746
tae-r.2
for
123187537
tae-r.2
for
123051602
tae-r.2
for
123043742
hvu-r.1
for
123424762
bdi-r.1
for
100835461
ath-u.5
for
AT5G12410
gma-u.5
for
100812892
gma-u.5
for
100776466
sly-u.5
for
101265890
bra-r.6
for
103855976
bra-r.6
for
103846640
vvi-u.5
for
100244787
ppo-u.5
for
7467981
ppo-u.5
for
7467389
mtr-u.5
for
11436214
ghi-r.1
for
107891433
ghi-r.1
for
107889304
bna-r.1
for
106419840
bna-r.1
for
106372367
bna-r.1
for
106424592
sot-r.1
for
102579706
cit-r.1
for
102627041
nta-r.1
for
107777364
nta-r.1
for
107782019
cre-r.1
for
CHLRE_14g629550v5


Ortholog ID: 8126
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100282152 LOC8071932 LOC4350746 LOC123187537 LOC123051602 LOC123043742 LOC123424762 LOC100835461 AT5G12410 LOC100812892 LOC100776466 LOC101265890 LOC103855976 LOC103846640 LOC100244787 LOC7467981 LOC7467389 LOC11436214 LOC107891433 LOC107889304 LOC106372367 LOC106424592 LOC106454627 LOC102579706 LOC102627041 LOC107777364 LOC107782019 CHLRE_14g629550v5
Function* uncharacterized LOC100282152 uncharacterized LOC8071932 uncharacterized LOC4350746 THUMP domain-containing protein 1 homolog uncharacterized LOC123051602 uncharacterized LOC123043742 translation initiation factor IF-2 uncharacterized LOC100835461 THUMP domain-containing protein uncharacterized LOC100812892 THUMP domain-containing protein 1 homolog uncharacterized LOC101265890 THUMP domain-containing protein 1 THUMP domain-containing protein 1 uncharacterized LOC100244787 uncharacterized LOC7467981 uncharacterized LOC7467389 THUMP domain-containing protein 1 homolog THUMP domain-containing protein 1 THUMP domain-containing protein 1 THUMP domain-containing protein 1 YTH domain-containing protein 1 THUMP domain-containing protein 1 homolog THUMP domain-containing protein 1 homolog uncharacterized LOC102627041 uncharacterized LOC107777364 uncharacterized LOC107782019 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 2
bna00561 Glycerolipid metabolism 2
bna00600 Sphingolipid metabolism 2
bna00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 3
bna00561 Glycerolipid metabolism 3
bna00600 Sphingolipid metabolism 3
bna00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100282152 8071932 4350746 123187537 123051602 123043742 123424762 100835461 831116 100812892 100776466 101265890 103855976 103846640 100244787 7467981 7467389 11436214 107891433 107889304 106372367 106424592 106454627 102579706 102627041 107777364 107782019 5718364
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