ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	103641842	embryo sac development arrest 6
zma-r.6	103641842	embryo sac development arrest 6
zma-u.5	100276584	uncharacterized LOC100276584
zma-u.5	100275177	embryo sac development arrest 6
zma-u.5	100278037	uncharacterized LOC100278037
sbi-r.1	8066154	uncharacterized LOC8066154
sbi-r.1	8064472	eukaryotic translation initiation factor 5B
osa-u.5	4330015	pistil-specific extensin-like protein
osa-u.5	4336385	uncharacterized LOC4336385
tae-r.2	123046134	uncharacterized LOC123046134
hvu-r.1	123430528	uncharacterized LOC123430528
hvu-r.1	123401823	uncharacterized LOC123401823
bdi-r.1	100841861	uncharacterized LOC100841861
bdi-r.1	100846594	poly(U)-specific endoribonuclease homolog
ath-u.5	AT5G44060	embryo sac development arrest protein
ath-u.5	AT1G04000	uncharacterized protein
ath-u.5	EDA6	embryo sac development arrest 6
gma-u.5	100801172	uncharacterized LOC100801172
gma-u.5	100798647	uncharacterized LOC100798647
sly-u.5	101257706	uncharacterized LOC101257706
bra-r.6	103860002	uncharacterized LOC103860002
bra-r.6	103843676	uncharacterized LOC103843676
bra-r.6	103839207	uncharacterized LOC103839207
vvi-u.5	100242917	uncharacterized LOC100242917
vvi-u.5	100253191	uncharacterized LOC100253191
vvi-u.5	100242675	uncharacterized LOC100242675
ppo-u.5	7461503	uncharacterized LOC7461503
mtr-u.5	11424446	uncharacterized LOC11424446
mtr-u.5	25484224	uncharacterized LOC25484224
ghi-r.1	107929020	uncharacterized LOC107929020
ghi-r.1	107936218	uncharacterized LOC107936218
ghi-r.1	107958630	uncharacterized LOC107958630
bna-r.1	125577907	uncharacterized LOC125577907
bna-r.1	BNAC09G51790D	uncharacterized BNAC09G51790D
sot-r.1	102580428	uncharacterized LOC102580428
cit-r.1	102616537	uncharacterized LOC102616537
cit-r.1	102625171	hypothetical protein
nta-r.1	107796565	uncharacterized LOC107796565

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_020401389.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_E.R. 2, chlo 1, mito 1, chlo_mito 1

(predict for XP_020401389.1)

Subcellular
localization
TargetP

other 4, mito 3

(predict for XP_020401389.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103641842	zma-r.6 for 103641842	zma-u.5 for 100276584	zma-u.5 for 100275177	zma-u.5 for 100278037	sbi-r.1 for 8066154	sbi-r.1 for 8064472	osa-u.5 for 4330015	osa-u.5 for 4336385	tae-r.2 for 123046134	hvu-r.1 for 123430528	hvu-r.1 for 123401823	bdi-r.1 for 100841861	bdi-r.1 for 100846594	ath-u.5 for AT5G44060	ath-u.5 for AT1G04000	ath-u.5 for EDA6	gma-u.5 for 100801172	gma-u.5 for 100798647	sly-u.5 for 101257706	bra-r.6 for 103860002	bra-r.6 for 103843676	bra-r.6 for 103839207	vvi-u.5 for 100242917	vvi-u.5 for 100253191	vvi-u.5 for 100242675	ppo-u.5 for 7461503	mtr-u.5 for 11424446	mtr-u.5 for 25484224	ghi-r.1 for 107929020	ghi-r.1 for 107936218	ghi-r.1 for 107958630	bna-r.1 for 125577907	bna-r.1 for BNAC09G51790D	sot-r.1 for 102580428	cit-r.1 for 102616537	cit-r.1 for 102625171	nta-r.1 for 107796565

Ortholog

Ortholog ID: 2048

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

EDA6

Function^*

uncharacterized LOC100276584

embryo sac development arrest 6

uncharacterized LOC100278037

uncharacterized LOC8066154

eukaryotic translation initiation factor 5B

pistil-specific extensin-like protein

uncharacterized LOC4336385

uncharacterized LOC123185771

branchpoint-bridging protein

uncharacterized LOC123130692

uncharacterized LOC123430528

uncharacterized LOC123401823

uncharacterized LOC100841861

poly(U)-specific endoribonuclease homolog

embryo sac development arrest protein

uncharacterized protein

embryo sac development arrest 6

uncharacterized LOC100801172

uncharacterized LOC100798647

uncharacterized LOC100791482

uncharacterized LOC101257706

uncharacterized LOC103860002

uncharacterized LOC103843676

uncharacterized LOC100242917

uncharacterized LOC100253191

uncharacterized LOC100242675

uncharacterized LOC7461503

uncharacterized LOC11424446

uncharacterized LOC25484224

uncharacterized LOC121219934

uncharacterized LOC121223773

uncharacterized LOC121203776

uncharacterized BNAC09G51790D

uncharacterized LOC102580428

uncharacterized LOC102616537

hypothetical protein

uncharacterized LOC107796565

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00290	Valine, leucine and isoleucine biosynthesis	4
tae01210	2-Oxocarboxylic acid metabolism	4
tae01230	Biosynthesis of amino acids	4
tae00660	C5-Branched dibasic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00740	Riboflavin metabolism	2
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	6
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma04141	Protein processing in endoplasmic reticulum	3
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100276584

100275177

100278037

8066154

8064472

4330015

4336385

123185771

123134241

123130692

123430528

123401823

100841861

100846594

834429

839339

28719309

100801172

100798647

100791482

101257706

103860002

103843676

100242917

100253191

100242675

7461503

11424446

25484224

121219934

121223773

121203776

106416394

102580428

102616537

102625171

107796565

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103641842 (zma-u.5 coexpression data)

Top 50 enrichment test to 103641842 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	2	2	1	2	2	3	2	1	3	3	1	2	3	2	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103641842 (zma-u.5 coexpression data)

Top 50 enrichment test to 103641842 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**