ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100242675	uncharacterized LOC100242675
vvi-r.5	100242675	uncharacterized LOC100242675
vvi-u.5	100253191	uncharacterized LOC100253191
vvi-u.5	100242917	uncharacterized LOC100242917
ath-u.5	AT5G44060	embryo sac development arrest protein
ath-u.5	AT1G04000	uncharacterized protein
ath-u.5	EDA6	embryo sac development arrest 6
gma-u.5	100801172	uncharacterized LOC100801172
gma-u.5	100798647	uncharacterized LOC100798647
bra-r.6	103828122	uncharacterized LOC103828122
bra-r.6	103839207	uncharacterized LOC103839207
bra-r.6	103843676	uncharacterized LOC103843676
ppo-u.5	7461503	uncharacterized LOC7461503
mtr-u.5	25484224	uncharacterized LOC25484224
mtr-u.5	11424446	uncharacterized LOC11424446
ghi-r.1	107936218	uncharacterized LOC107936218
ghi-r.1	107958630	uncharacterized LOC107958630
ghi-r.1	107929020	uncharacterized LOC107929020
bna-r.1	125577907	uncharacterized LOC125577907
bna-r.1	BNAC09G51790D	uncharacterized BNAC09G51790D
cit-r.1	102616537	uncharacterized LOC102616537
cit-r.1	102625171	hypothetical protein
sly-u.5	101257706	uncharacterized LOC101257706
sot-r.1	102580428	uncharacterized LOC102580428
nta-r.1	107796565	uncharacterized LOC107796565
osa-u.5	4330015	pistil-specific extensin-like protein
osa-u.5	4336385	uncharacterized LOC4336385
zma-u.5	103641842	embryo sac development arrest 6
zma-u.5	100275177	embryo sac development arrest 6
zma-u.5	100276584	uncharacterized LOC100276584
tae-r.2	123046134	uncharacterized LOC123046134
tae-r.2	123130692	uncharacterized LOC123130692
hvu-r.1	123430528	uncharacterized LOC123430528
hvu-r.1	123401823	uncharacterized LOC123401823
sbi-r.1	8066154	uncharacterized LOC8066154
sbi-r.1	8064472	eukaryotic translation initiation factor 5B
bdi-r.1	100841861	uncharacterized LOC100841861
bdi-r.1	100846594	poly(U)-specific endoribonuclease homolog

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_010650118.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, mito 2, chlo 1, mito_plas 1

(predict for XP_010650118.1)

Subcellular
localization
TargetP

mito 4, other 3

(predict for XP_010650118.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100242675	vvi-r.5 for 100242675	vvi-u.5 for 100253191	vvi-u.5 for 100242917	ath-u.5 for AT5G44060	ath-u.5 for AT1G04000	ath-u.5 for EDA6	gma-u.5 for 100801172	gma-u.5 for 100798647	bra-r.6 for 103828122	bra-r.6 for 103839207	bra-r.6 for 103843676	ppo-u.5 for 7461503	mtr-u.5 for 25484224	mtr-u.5 for 11424446	ghi-r.1 for 107936218	ghi-r.1 for 107958630	ghi-r.1 for 107929020	bna-r.1 for 125577907	bna-r.1 for BNAC09G51790D	cit-r.1 for 102616537	cit-r.1 for 102625171	sly-u.5 for 101257706	sot-r.1 for 102580428	nta-r.1 for 107796565	osa-u.5 for 4330015	osa-u.5 for 4336385	zma-u.5 for 103641842	zma-u.5 for 100275177	zma-u.5 for 100276584	tae-r.2 for 123046134	tae-r.2 for 123130692	hvu-r.1 for 123430528	hvu-r.1 for 123401823	sbi-r.1 for 8066154	sbi-r.1 for 8064472	bdi-r.1 for 100841861	bdi-r.1 for 100846594

Ortholog

Ortholog ID: 2048

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

EDA6

Function^*

uncharacterized LOC100242675

uncharacterized LOC100253191

uncharacterized LOC100242917

embryo sac development arrest protein

uncharacterized protein

embryo sac development arrest 6

uncharacterized LOC100801172

uncharacterized LOC100798647

uncharacterized LOC100791482

uncharacterized LOC103843676

uncharacterized LOC103860002

uncharacterized LOC7461503

uncharacterized LOC25484224

uncharacterized LOC11424446

uncharacterized LOC121219934

uncharacterized LOC121223773

uncharacterized LOC121203776

uncharacterized BNAC09G51790D

uncharacterized LOC102616537

hypothetical protein

uncharacterized LOC101257706

uncharacterized LOC102580428

uncharacterized LOC107796565

pistil-specific extensin-like protein

uncharacterized LOC4336385

embryo sac development arrest 6

uncharacterized LOC100276584

uncharacterized LOC100278037

uncharacterized LOC123130692

uncharacterized LOC123185771

branchpoint-bridging protein

uncharacterized LOC123430528

uncharacterized LOC123401823

uncharacterized LOC8066154

eukaryotic translation initiation factor 5B

uncharacterized LOC100841861

poly(U)-specific endoribonuclease homolog

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	6
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma04141	Protein processing in endoplasmic reticulum	3
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00290	Valine, leucine and isoleucine biosynthesis	4
tae01210	2-Oxocarboxylic acid metabolism	4
tae01230	Biosynthesis of amino acids	4
tae00660	C5-Branched dibasic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00740	Riboflavin metabolism	2
hvu01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100242675

100253191

100242917

834429

839339

28719309

100801172

100798647

100791482

103843676

103860002

7461503

25484224

11424446

121219934

121223773

121203776

106416394

102616537

102625171

101257706

102580428

107796565

4330015

4336385

100275177

100276584

100278037

123130692

123185771

123134241

123430528

123401823

8066154

8064472

100841861

100846594

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100242675 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100242675 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	1	2	3	2	2	1	1	1	2	3	2	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100242675 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100242675 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**