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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103649988   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 zma-r.6   103649988   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sbi-r.1   8085827   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 tae-r.2   123078100   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 tae-r.2   123061028   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 tae-r.2   123069616   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 hvu-r.1   123443451   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 bdi-r.1   100846389   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ath-u.5   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100783405   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sly-u.5   101244188   pentatricopeptide repeat-containing protein 
 bra-r.6   103845163   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 vvi-u.5   100266493   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ppo-u.5   18107833   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 mtr-u.5   11444894   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ghi-r.1   107916860   pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like 
 ghi-r.1   121210544   pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like 
 bna-r.1   106401077   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 bna-r.1   111212944   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sot-r.1   102585306   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 cit-r.1   102624866   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 nta-r.1   107785341   pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like 
 nta-r.1   107832733   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 

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Top 50 coexpressed genes to 103649988 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103649988 (zma-u.5 coexpression data)

CoexMap"103649988"


zmaLOC103649988 | Entrez gene ID : 103649988      
Species zma sbi tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta osa cre
Paralog 2 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008673895.1 [sequence] [blastp]
XP_020405773.1 [sequence] [blastp]
XP_020405774.1 [sequence] [blastp]
XP_020405775.1 [sequence] [blastp]
XP_020405777.1 [sequence] [blastp]
XP_020405778.1 [sequence] [blastp]
XP_035822083.1 [sequence] [blastp]
XP_035822084.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_008673895.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_020405773.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_020405774.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_020405775.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_020405777.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_020405778.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_035822083.1)
chlo 6,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_035822084.1)
Subcellular
localization
TargetP
other 7,  chlo 7  (predict for XP_008673895.1)
other 7,  chlo 7  (predict for XP_020405773.1)
other 7,  chlo 7  (predict for XP_020405774.1)
other 7,  chlo 7  (predict for XP_020405775.1)
other 7,  chlo 7  (predict for XP_020405777.1)
other 7,  chlo 7  (predict for XP_020405778.1)
other 7,  chlo 7  (predict for XP_035822083.1)
other 7,  chlo 7  (predict for XP_035822084.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103649988
zma-r.6
for
103649988
sbi-r.1
for
8085827
tae-r.2
for
123078100
tae-r.2
for
123061028
tae-r.2
for
123069616
hvu-r.1
for
123443451
bdi-r.1
for
100846389
ath-u.5
for
AT5G57250
gma-u.5
for
100783405
sly-u.5
for
101244188
bra-r.6
for
103845163
vvi-u.5
for
100266493
ppo-u.5
for
18107833
mtr-u.5
for
11444894
ghi-r.1
for
107916860
ghi-r.1
for
121210544
bna-r.1
for
106401077
bna-r.1
for
111212944
sot-r.1
for
102585306
cit-r.1
for
102624866
nta-r.1
for
107785341
nta-r.1
for
107832733


Ortholog ID: 6447
Species zma sbi tae tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC103649988 LOC8085827 LOC123078100 LOC123061028 LOC123069616 LOC123443451 LOC100846389 AT5G57250 LOC100783405 LOC101244188 LOC103845163 LOC100266493 LOC18107833 LOC11444894 LOC107916860 LOC107962935 LOC107926292 LOC106401077 LOC111212944 LOC102585306 LOC102624866 LOC107785341 LOC107832733
Function* pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103649988 8085827 123078100 123061028 123069616 123443451 100846389 5008310 100783405 101244188 103845163 100266493 18107833 11444894 107916860 107962935 107926292 106401077 111212944 102585306 102624866 107785341 107832733
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