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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123069616   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 zma-u.5   103649988   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ath-u.5   AT5G57250   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100783405   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 sly-u.5   101244188   pentatricopeptide repeat-containing protein 
 vvi-u.5   100266493   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 ppo-u.5   18107833   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 
 mtr-u.5   11444894   pentatricopeptide repeat-containing protein At5g57250, mitochondrial 

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Top 50 coexpressed genes to 123069616 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123069616 (tae-r.2 coexpression data)

CoexMap"123069616"


taeLOC123069616 | Entrez gene ID : 123069616    
Species tae zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi osa sot nta cre
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044348441.1 [sequence] [blastp]
XP_044348442.1 [sequence] [blastp]
XP_044348444.1 [sequence] [blastp]
XP_044348445.1 [sequence] [blastp]
XP_044348446.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  cyto 2,  nucl_plas 2,  chlo 1,  nucl 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_044348441.1)
plas 3,  cyto 2,  nucl_plas 2,  chlo 1,  nucl 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_044348442.1)
plas 3,  cyto 2,  nucl_plas 2,  chlo 1,  nucl 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_044348444.1)
plas 3,  cyto 2,  nucl_plas 2,  chlo 1,  nucl 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_044348445.1)
plas 3,  cyto 2,  nucl_plas 2,  chlo 1,  nucl 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_044348446.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044348441.1)
other 8  (predict for XP_044348442.1)
other 8  (predict for XP_044348444.1)
other 8  (predict for XP_044348445.1)
other 8  (predict for XP_044348446.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123069616
zma-u.5
for
103649988
ath-u.5
for
AT5G57250
gma-u.5
for
100783405
sly-u.5
for
101244188
vvi-u.5
for
100266493
ppo-u.5
for
18107833
mtr-u.5
for
11444894


Ortholog ID: 6447
Species tae tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123061028 LOC123069616 LOC123443451 LOC100846389 LOC103649988 LOC8085827 AT5G57250 LOC100783405 LOC101244188 LOC103845163 LOC100266493 LOC18107833 LOC11444894 LOC107926292 LOC107962935 LOC106401077 LOC111212944 LOC102585306 LOC102624866 LOC107785341 LOC107832733
Function* pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like pentatricopeptide repeat-containing protein At5g57250, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123061028 123069616 123443451 100846389 103649988 8085827 5008310 100783405 101244188 103845163 100266493 18107833 11444894 107926292 107962935 106401077 111212944 102585306 102624866 107785341 107832733
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