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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  103654875  negative regulator of systemic acquired resistance SNI1 
 zma-r.6  103654875  negative regulator of systemic acquired resistance SNI1 
 sbi-r.1  8077635  negative regulator of systemic acquired resistance SNI1 
 osa-u.5  4329134  negative regulator of systemic acquired resistance SNI1 
 tae-r.2  123137383  negative regulator of systemic acquired resistance SNI1 
 tae-r.2  123144725  negative regulator of systemic acquired resistance SNI1 
 tae-r.2  123159378  negative regulator of systemic acquired resistance SNI1-like 
 hvu-r.1  123401352  negative regulator of systemic acquired resistance SNI1 
 bdi-r.1  100842963  negative regulator of systemic acquired resistance SNI1 
 gma-u.5  732620  SNI1 
 gma-u.5  100799607  negative regulator of systemic acquired resistance SNI1 
 sly-u.5  101244924  SNI1-like protein 
 vvi-u.5  100245146  negative regulator of systemic acquired resistance SNI1 
 mtr-u.5  25493046  negative regulator of systemic acquired resistance SNI1 
 ghi-r.1  107925022  negative regulator of systemic acquired resistance SNI1 
 ghi-r.1  121222303  negative regulator of systemic acquired resistance SNI1 
 sot-r.1  SNI1  uncharacterized LOC102579425 
 cit-r.1  102624079  negative regulator of systemic acquired resistance SNI1 
 nta-r.1  107792834  negative regulator of systemic acquired resistance SNI1-like 
 nta-r.1  107784660  negative regulator of systemic acquired resistance SNI1 

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Top 50 coexpressed genes to 103654875 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103654875 (zma-u.5 coexpression data)

CoexMap"103654875"


zmaLOC103654875 | Entrez gene ID : 103654875
Species zma sbi osa tae hvu bdi gma sly vvi mtr ghi sot cit nta cre ath ppo bra bna
Paralog 2 1 1 3 1 1 2 1 1 1 2 1 1 2 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010113 [list] [network] negative regulation of systemic acquired resistance  (1 genes)  IEA  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (84 genes)  IEA  
GO:0006974 [list] [network] DNA damage response  (368 genes)  IEA  
GO CC
GO:0030915 [list] [network] Smc5-Smc6 complex  (9 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (440 genes)  IEA  
Protein XP_020408506.1 [sequence] [blastp]
XP_020408508.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_020408506.1)
chlo 4,  cyto 4,  nucl 1,  mito 1,  extr 1  (predict for XP_020408508.1)
Subcellular
localization
TargetP
scret 9,  other 3  (predict for XP_020408506.1)
other 7  (predict for XP_020408508.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
103654875


zma-r.6
for
103654875


sbi-r.1
for
8077635


osa-u.5
for
4329134


tae-r.2
for
123137383


tae-r.2
for
123144725


tae-r.2
for
123159378


hvu-r.1
for
123401352


bdi-r.1
for
100842963


gma-u.5
for
732620


gma-u.5
for
100799607


sly-u.5
for
101244924


vvi-u.5
for
100245146


mtr-u.5
for
25493046


ghi-r.1
for
107925022


ghi-r.1
for
121222303


sot-r.1
for
SNI1


cit-r.1
for
102624079


nta-r.1
for
107792834


nta-r.1
for
107784660



Ortholog ID: 8543
Species zma sbi osa tae tae tae hvu bdi gma gma sly vvi mtr ghi ghi sot cit nta nta
Symbol LOC103654875 LOC8077635 LOC4329134 LOC123144725 LOC123159378 LOC123127618 LOC123401352 LOC100842963 LOC732620 LOC100799607 LOC101244924 LOC100245146 LOC25493046 LOC107925022 LOC121222303 SNI1 LOC102624079 LOC107792834 LOC107784660
Function* negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1-like negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 SNI1 negative regulator of systemic acquired resistance SNI1 SNI1-like protein negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 uncharacterized LOC102579425 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1-like negative regulator of systemic acquired resistance SNI1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03440 Homologous recombination 2
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa04144 Endocytosis 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03440 Homologous recombination 6
tae03460 Fanconi anemia pathway 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03430 Mismatch repair 3
mtr03010 Ribosome 2
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 6
ghi03430 Mismatch repair 6
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 6
ghi03430 Mismatch repair 6
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03440 Homologous recombination 2
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103654875 8077635 4329134 123144725 123159378 123127618 123401352 100842963 732620 100799607 101244924 100245146 25493046 107925022 121222303 102579425 102624079 107792834 107784660
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