ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100823800	uncharacterized LOC100823800
tae-r.2	123144666	uncharacterized LOC123144666
tae-r.2	123137161	uncharacterized LOC123137161
hvu-r.1	123404766	uncharacterized LOC123404766
osa-u.5	4329830	uncharacterized LOC4329830
zma-u.5	100382616	uncharacterized LOC100382616
sbi-r.1	8070584	uncharacterized LOC8070584
ath-u.5	AT5G12920	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100780441	uncharacterized LOC100780441
sly-u.5	101261879	uncharacterized LOC101261879
vvi-u.5	100243206	uncharacterized LOC100243206
mtr-u.5	25492608	uncharacterized LOC25492608
ghi-r.1	107891392	uncharacterized LOC107891392
ghi-r.1	121220888	uncharacterized LOC121220888
ghi-r.1	107889345	uncharacterized LOC107889345
sot-r.1	102584910	uncharacterized LOC102584910
cit-r.1	102623138	hypothetical protein
nta-r.1	107821680	uncharacterized LOC107821680
nta-r.1	107766772	uncharacterized LOC107766772

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4040 genes)

IEA

Protein

XP_003575259.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 3, mito 1, cysk 1

(predict for XP_003575259.2)

Subcellular
localization
TargetP

chlo 7

(predict for XP_003575259.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100823800	tae-r.2 for 123144666	tae-r.2 for 123137161	hvu-r.1 for 123404766	osa-u.5 for 4329830	zma-u.5 for 100382616	sbi-r.1 for 8070584	ath-u.5 for AT5G12920	gma-u.5 for 100780441	sly-u.5 for 101261879	vvi-u.5 for 100243206	mtr-u.5 for 25492608	ghi-r.1 for 107891392	ghi-r.1 for 121220888	ghi-r.1 for 107889345	sot-r.1 for 102584910	cit-r.1 for 102623138	nta-r.1 for 107821680	nta-r.1 for 107766772

Ortholog

Ortholog ID: 11403

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

vvi

mtr

ghi

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100823800

uncharacterized LOC123144666

uncharacterized LOC123137161

uncharacterized LOC123404766

uncharacterized LOC4329830

uncharacterized LOC100382616

uncharacterized LOC8070584

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC100780441

uncharacterized LOC101261879

uncharacterized LOC100243206

uncharacterized LOC25492608

uncharacterized LOC107891392

uncharacterized LOC121220888

uncharacterized LOC107889345

uncharacterized LOC102584910

hypothetical protein

uncharacterized LOC107821680

uncharacterized LOC107766772

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	5
bdi00300	Lysine biosynthesis	3
bdi03440	Homologous recombination	2
bdi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03430	Mismatch repair	6
zma03030	DNA replication	5
zma03410	Base excision repair	4
zma03420	Nucleotide excision repair	4
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	9
ath03440	Homologous recombination	3
ath03460	Fanconi anemia pathway	3
ath03420	Nucleotide excision repair	3
ath03430	Mismatch repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	13
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03460	Fanconi anemia pathway	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	6
vvi03410	Base excision repair	2
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	10
ghi03410	Base excision repair	6
ghi03420	Nucleotide excision repair	4
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	7
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	2
sot03410	Base excision repair	2
sot03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

100823800

123144666

123137161

123404766

4329830

100382616

8070584

831132

100780441

101261879

100243206

25492608

107891392

121220888

107889345

102584910

102623138

107821680

107766772

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100823800 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100823800 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	vvi	mtr	ghi	sot	cit	nta	cre	bna	bra	ppo
Paralog	1	2	1	1	1	1	1	1	1	1	1	3	1	1	2	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100823800 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100823800 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**