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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780441   uncharacterized LOC100780441 
 gma-r.7   100780441   uncharacterized LOC100780441 
 gma-m.5   100780441   uncharacterized LOC100780441 
 mtr-u.5   25492608   uncharacterized LOC25492608 
 ath-u.5   AT5G12920   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100243206   uncharacterized LOC100243206 
 ghi-r.1   107889345   uncharacterized LOC107889345 
 ghi-r.1   121220888   uncharacterized LOC121220888 
 ghi-r.1   107891392   uncharacterized LOC107891392 
 cit-r.1   102623138   hypothetical protein 
 sly-u.5   101261879   uncharacterized LOC101261879 
 sot-r.1   102584910   uncharacterized LOC102584910 
 nta-r.1   107821680   uncharacterized LOC107821680 
 nta-r.1   107766772   uncharacterized LOC107766772 
 osa-u.5   4329830   uncharacterized LOC4329830 
 zma-u.5   100382616   uncharacterized LOC100382616 
 tae-r.2   123144666   uncharacterized LOC123144666 
 tae-r.2   123137161   uncharacterized LOC123137161 
 hvu-r.1   123404766   uncharacterized LOC123404766 
 sbi-r.1   8070584   uncharacterized LOC8070584 
 bdi-r.1   100823800   uncharacterized LOC100823800 

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Top 50 coexpressed genes to 100780441 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780441 (gma-u.5 coexpression data)

CoexMap"100780441"


gmaLOC100780441 | Entrez gene ID : 100780441      
Species gma mtr ath vvi ghi cit sly sot nta osa zma tae hvu sbi bdi ppo cre bra bna
Paralog 3 1 1 1 3 1 1 1 2 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003539058.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto_nucl 2,  plas 1,  golg_plas 1  (predict for XP_003539058.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_003539058.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780441
gma-r.7
for
100780441
gma-m.5
for
100780441
mtr-u.5
for
25492608
ath-u.5
for
AT5G12920
vvi-u.5
for
100243206
ghi-r.1
for
107889345
ghi-r.1
for
121220888
ghi-r.1
for
107891392
cit-r.1
for
102623138
sly-u.5
for
101261879
sot-r.1
for
102584910
nta-r.1
for
107821680
nta-r.1
for
107766772
osa-u.5
for
4329830
zma-u.5
for
100382616
tae-r.2
for
123144666
tae-r.2
for
123137161
hvu-r.1
for
123404766
sbi-r.1
for
8070584
bdi-r.1
for
100823800


Ortholog ID: 11403
Species gma mtr ath vvi ghi ghi ghi cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100780441 LOC25492608 AT5G12920 LOC100243206 LOC107889345 LOC121220888 LOC107891392 LOC102623138 LOC101261879 LOC102584910 LOC107821680 LOC107766772 LOC4329830 LOC100382616 LOC123144666 LOC123137161 LOC123404766 LOC8070584 LOC100823800
Function* uncharacterized LOC100780441 uncharacterized LOC25492608 Transducin/WD40 repeat-like superfamily protein uncharacterized LOC100243206 uncharacterized LOC107889345 uncharacterized LOC121220888 uncharacterized LOC107891392 hypothetical protein uncharacterized LOC101261879 uncharacterized LOC102584910 uncharacterized LOC107821680 uncharacterized LOC107766772 uncharacterized LOC4329830 uncharacterized LOC100382616 uncharacterized LOC123144666 uncharacterized LOC123137161 uncharacterized LOC123404766 uncharacterized LOC8070584 uncharacterized LOC100823800
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 13
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 6
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 10
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 2
sot03410 Base excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 6
zma03030 DNA replication 5
zma03410 Base excision repair 4
zma03420 Nucleotide excision repair 4
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 5
bdi00300 Lysine biosynthesis 3
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780441 25492608 831132 100243206 107889345 121220888 107891392 102623138 101261879 102584910 107821680 107766772 4329830 100382616 123144666 123137161 123404766 8070584 100823800
The preparation time of this page was 2.5 [sec].