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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  100824031  30S ribosomal protein S6 
 tae-r.2  123119752  uncharacterized LOC123119752 
 tae-r.2  123110746  uncharacterized LOC123110746 
 tae-r.2  123102554  uncharacterized LOC123102554 
 hvu-r.1  123452761  uncharacterized LOC123452761 
 zma-u.5  100284375  30S ribosomal protein S6-like 
 sbi-r.1  8068847  uncharacterized LOC8068847 
 ath-u.5  RFC3  Translation elongation factor EF1B/ribosomal protein S6 family protein 
 gma-u.5  100812111  uncharacterized LOC100812111 
 gma-u.5  100790128  uncharacterized LOC100790128 
 sly-u.5  101245198  ribosomal protein S6-like protein 
 bra-r.6  103839669  nucleolar transcription factor 1-A 
 vvi-u.5  100243195  protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 ppo-u.5  7471092  protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 mtr-u.5  11416822  uncharacterized LOC11416822 
 ghi-r.1  107916220  acidic leucine-rich nuclear phosphoprotein 32 family member A 
 ghi-r.1  107896404  putative vacuolar protein sorting-associated protein 13F 
 bna-r.1  106401850  glutamic acid-rich protein 
 bna-r.1  106437134  nucleolar transcription factor 1 
 sot-r.1  102594367  uncharacterized LOC102594367 
 cit-r.1  102607783  protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 nta-r.1  107764056  protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 
 nta-r.1  107759286  protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 

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Top 50 coexpressed genes to 100824031 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824031 (bdi-r.1 coexpression data)

CoexMap"100824031"


bdiLOC100824031 | Entrez gene ID : 100824031
Species bdi tae hvu zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta osa cre
Paralog 1 3 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (440 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (68 genes)  IEA  
GO:0005840 [list] [network] ribosome  (310 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (13 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (306 genes)  IEA  
Protein XP_003579164.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003579164.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003579164.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
100824031


tae-r.2
for
123119752


tae-r.2
for
123110746


tae-r.2
for
123102554


hvu-r.1
for
123452761


zma-u.5
for
100284375


sbi-r.1
for
8068847


ath-u.5
for
RFC3


gma-u.5
for
100812111


gma-u.5
for
100790128


sly-u.5
for
101245198


bra-r.6
for
103839669


vvi-u.5
for
100243195


ppo-u.5
for
7471092


mtr-u.5
for
11416822


ghi-r.1
for
107916220


ghi-r.1
for
107896404


bna-r.1
for
106401850


bna-r.1
for
106437134


sot-r.1
for
102594367


cit-r.1
for
102607783


nta-r.1
for
107764056


nta-r.1
for
107759286



Ortholog ID: 10774
Species bdi tae tae tae hvu zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100824031 LOC123119752 LOC123110746 LOC123102554 LOC123452761 LOC100284375 LOC8068847 RFC3 LOC100812111 LOC100790128 LOC101245198 LOC103839669 LOC100243195 LOC7471092 LOC11416822 LOC107916220 LOC107896404 LOC106401850 LOC106437134 LOC102594367 LOC102607783 LOC107764056 LOC107759286
Function* 30S ribosomal protein S6 uncharacterized LOC123119752 uncharacterized LOC123110746 uncharacterized LOC123102554 uncharacterized LOC123452761 30S ribosomal protein S6-like uncharacterized LOC8068847 Translation elongation factor EF1B/ribosomal protein S6 family protein uncharacterized LOC100812111 uncharacterized LOC100790128 ribosomal protein S6-like protein nucleolar transcription factor 1-A protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic uncharacterized LOC11416822 acidic leucine-rich nuclear phosphoprotein 32 family member A putative vacuolar protein sorting-associated protein 13F glutamic acid-rich protein nucleolar transcription factor 1 uncharacterized LOC102594367 protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824031 123119752 123110746 123102554 123452761 100284375 8068847 820974 100812111 100790128 101245198 103839669 100243195 7471092 11416822 107916220 107896404 106401850 106437134 102594367 102607783 107764056 107759286
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