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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824078   UBP1-associated proteins 1C 
 tae-r.2   123070001   UBP1-associated proteins 1C 
 tae-r.2   123061355   UBP1-associated proteins 1C 
 tae-r.2   123078459   UBP1-associated proteins 1C 
 hvu-r.1   123443760   UBP1-associated proteins 1C 
 osa-u.5   4324202   UBP1-associated proteins 1C 
 zma-u.5   100194397   RNA-binding protein 
 sbi-r.1   8078644   UBP1-associated proteins 1C 
 ath-u.5   AT2G19385   zinc ion binding protein 
 gma-u.5   100790703   LYAR-type C2HC zinc finger protein 
 gma-u.5   100790272   UBP1-associated proteins 1C 
 sly-u.5   101260741   UBP1-associated proteins 1C 
 bra-r.6   103828305   UBP1-associated proteins 1C 
 vvi-u.5   100252615   UBP1-associated proteins 1C 
 ppo-u.5   7497597   UBP1-associated proteins 1C 
 mtr-u.5   25494199   UBP1-associated proteins 1C 
 ghi-r.1   107932258   UBP1-associated proteins 1C 
 ghi-r.1   107929868   UBP1-associated proteins 1C 
 bna-r.1   106357609   UBP1-associated proteins 1C 
 bna-r.1   125590711   UBP1-associated proteins 1C-like 
 sot-r.1   102594512   UBP1-associated proteins 1C 
 cit-r.1   102627652   UBP1-associated proteins 1C 
 nta-r.1   107771467   uncharacterized LOC107771467 
 nta-r.1   107762905   uncharacterized LOC107762905 
 cre-r.1   CHLRE_17g701050v5   uncharacterized protein 

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Top 50 coexpressed genes to 100824078 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824078 (bdi-r.1 coexpression data)

CoexMap"100824078"


bdiLOC100824078 | Entrez gene ID : 100824078      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (21 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (191 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (178 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003569264.1 [sequence] [blastp]
XP_024315382.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_003569264.1)
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for XP_024315382.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003569264.1)
mito 9  (predict for XP_024315382.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824078
tae-r.2
for
123070001
tae-r.2
for
123061355
tae-r.2
for
123078459
hvu-r.1
for
123443760
osa-u.5
for
4324202
zma-u.5
for
100194397
sbi-r.1
for
8078644
ath-u.5
for
AT2G19385
gma-u.5
for
100790703
gma-u.5
for
100790272
sly-u.5
for
101260741
bra-r.6
for
103828305
vvi-u.5
for
100252615
ppo-u.5
for
7497597
mtr-u.5
for
25494199
ghi-r.1
for
107932258
ghi-r.1
for
107929868
bna-r.1
for
106357609
bna-r.1
for
125590711
sot-r.1
for
102594512
cit-r.1
for
102627652
nta-r.1
for
107771467
nta-r.1
for
107762905
cre-r.1
for
CHLRE_17g701050v5


Ortholog ID: 9388
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100824078 LOC123070001 LOC123061355 LOC123078459 LOC123443760 LOC4324202 LOC100194397 LOC8078644 AT2G19385 LOC100790703 LOC100790272 LOC101260741 LOC103828305 LOC100252615 LOC7497597 LOC25494199 LOC107932258 LOC107929868 LOC106357609 LOC125590711 LOC102594512 LOC102627652 LOC107771467 LOC107762905 CHLRE_17g701050v5
Function* UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C RNA-binding protein UBP1-associated proteins 1C zinc ion binding protein LYAR-type C2HC zinc finger protein UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C UBP1-associated proteins 1C-like UBP1-associated proteins 1C UBP1-associated proteins 1C uncharacterized LOC107771467 uncharacterized LOC107762905 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824078 123070001 123061355 123078459 123443760 4324202 100194397 8078644 816457 100790703 100790272 101260741 103828305 100252615 7497597 25494199 107932258 107929868 106357609 125590711 102594512 102627652 107771467 107762905 5717301
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