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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828822   embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 
 tae-r.2   123136476   abasic site processing protein HMCES 
 hvu-r.1   123402206   abasic site processing protein HMCES 
 osa-u.5   4341015   uncharacterized LOC4341015 
 zma-u.5   100277594   uncharacterized LOC100277594 
 sbi-r.1   110436044   embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 
 ath-u.5   AT2G26470   embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 
 gma-u.5   100806739   abasic site processing protein YoqW 
 vvi-u.5   100248598   uncharacterized LOC100248598 
 ppo-u.5   7459516   uncharacterized LOC7459516 
 mtr-u.5   11436955   abasic site processing protein YoqW 
 ghi-r.1   121232282   abasic site processing protein YoqW 
 ghi-r.1   107955757   abasic site processing protein YoqW 
 bna-r.1   106415433   abasic site processing protein YoqW 
 bna-r.1   125578521   abasic site processing protein YoqW-like 
 cit-r.1   102620840   uncharacterized LOC102620840 
 nta-r.1   107774706   uncharacterized LOC107774706 
 nta-r.1   107768444   uncharacterized LOC107768444 
 cre-r.1   CHLRE_09g410000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100828822 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828822 (bdi-r.1 coexpression data)

CoexMap"100828822"


bdiLOC100828822 | Entrez gene ID : 100828822      
Species bdi tae hvu osa zma sbi ath gma vvi ppo mtr ghi bna cit nta cre sot bra sly
Paralog 1 1 1 1 1 1 1 1 1 1 1 2 2 1 2 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006974 [list] [network] DNA damage response  (317 genes)  IEA  
GO CC
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (65 genes)  IEA  
Protein XP_003576067.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  nucl 2,  chlo 2  (predict for XP_003576067.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_003576067.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828822
tae-r.2
for
123136476
hvu-r.1
for
123402206
osa-u.5
for
4341015
zma-u.5
for
100277594
sbi-r.1
for
110436044
ath-u.5
for
AT2G26470
gma-u.5
for
100806739
vvi-u.5
for
100248598
ppo-u.5
for
7459516
mtr-u.5
for
11436955
ghi-r.1
for
121232282
ghi-r.1
for
107955757
bna-r.1
for
106415433
bna-r.1
for
125578521
cit-r.1
for
102620840
nta-r.1
for
107774706
nta-r.1
for
107768444
cre-r.1
for
CHLRE_09g410000v5


Ortholog ID: 11248
Species bdi tae hvu osa zma sbi ath gma vvi ppo mtr ghi ghi bna bna cit nta nta cre
Symbol LOC100828822 LOC123136476 LOC123402206 LOC4341015 LOC100277594 LOC110436044 AT2G26470 LOC100806739 LOC100248598 LOC7459516 LOC11436955 LOC121232282 LOC107955757 LOC106415433 LOC125578521 LOC102620840 LOC107774706 LOC107768444 CHLRE_09g410000v5
Function* embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein abasic site processing protein HMCES abasic site processing protein HMCES uncharacterized LOC4341015 uncharacterized LOC100277594 embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein abasic site processing protein YoqW uncharacterized LOC100248598 uncharacterized LOC7459516 abasic site processing protein YoqW abasic site processing protein YoqW abasic site processing protein YoqW abasic site processing protein YoqW abasic site processing protein YoqW-like uncharacterized LOC102620840 uncharacterized LOC107774706 uncharacterized LOC107768444 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
ghi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 6
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 6
nta03420 Nucleotide excision repair 6
nta03410 Base excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 6
nta03420 Nucleotide excision repair 6
nta03410 Base excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828822 123136476 123402206 4341015 100277594 110436044 817188 100806739 100248598 7459516 11436955 121232282 107955757 106415433 125578521 102620840 107774706 107768444 5722266
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