ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100830255	elongation factor P
tae-r.2	123091533	elongation factor P
tae-r.2	123096494	elongation factor P
tae-r.2	123086461	elongation factor P
hvu-r.1	123448068	elongation factor P
osa-u.5	4349608	uncharacterized LOC4349608
osa-u.5	4351322	uncharacterized LOC4351322
zma-u.5	100285955	uncharacterized LOC100285955
sbi-r.1	8074861	elongation factor P
ath-u.5	AT3G08740	elongation factor P (EF-P) family protein
gma-u.5	100500109	uncharacterized LOC100500109
gma-u.5	100306051	elongation factor P
sly-u.5	101263649	uncharacterized LOC101263649
bra-r.6	103870595	elongation factor P
bra-r.6	103847515	elongation factor P
vvi-u.5	100241479	uncharacterized LOC100241479
ppo-u.5	7472473	uncharacterized LOC7472473
mtr-u.5	11427259	elongation factor P
ghi-r.1	107941819	elongation factor P
ghi-r.1	107928436	elongation factor P
bna-r.1	106402234	elongation factor P
bna-r.1	106436324	elongation factor P-like
bna-r.1	106452838	elongation factor P
sot-r.1	102594735	elongation factor P
cit-r.1	102627463	uncharacterized LOC102627463
nta-r.1	107801762	uncharacterized LOC107801762
nta-r.1	107827635	uncharacterized LOC107827635
cre-r.1	CHLRE_16g691000v5	uncharacterized protein
cre-r.1	CHLRE_16g690800v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0043043 [list] [network] peptide biosynthetic process	(7 genes)	IEA
GO:0006414 [list] [network] translational elongation	(40 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(4615 genes)

IEA

GO MF

GO:0003746 [list] [network] translation elongation factor activity

(29 genes)

IEA

Protein

XP_003577846.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_003577846.1)

Subcellular
localization
TargetP

mito 7, chlo 5

(predict for XP_003577846.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100830255	tae-r.2 for 123091533	tae-r.2 for 123096494	tae-r.2 for 123086461	hvu-r.1 for 123448068	osa-u.5 for 4349608	osa-u.5 for 4351322	zma-u.5 for 100285955	sbi-r.1 for 8074861	ath-u.5 for AT3G08740	gma-u.5 for 100500109	gma-u.5 for 100306051	sly-u.5 for 101263649	bra-r.6 for 103870595	bra-r.6 for 103847515	vvi-u.5 for 100241479	ppo-u.5 for 7472473	mtr-u.5 for 11427259	ghi-r.1 for 107941819	ghi-r.1 for 107928436	bna-r.1 for 106402234	bna-r.1 for 106436324	bna-r.1 for 106452838	sot-r.1 for 102594735	cit-r.1 for 102627463	nta-r.1 for 107801762	nta-r.1 for 107827635	cre-r.1 for CHLRE_16g691000v5	cre-r.1 for CHLRE_16g690800v5

Ortholog

Ortholog ID: 7985

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

elongation factor P

uncharacterized LOC4349608

uncharacterized LOC4351322

uncharacterized LOC100285955

elongation factor P

elongation factor P (EF-P) family protein

uncharacterized LOC100500109

elongation factor P

uncharacterized LOC101263649

elongation factor P

uncharacterized LOC100241479

uncharacterized LOC7472473

elongation factor P

elongation factor P-like

elongation factor P

uncharacterized LOC102627463

uncharacterized LOC107801762

uncharacterized LOC107827635

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	7
bdi00860	Porphyrin metabolism	3
bdi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00860	Porphyrin metabolism	2
hvu01240	Biosynthesis of cofactors	2
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	9
gma00860	Porphyrin metabolism	5
gma01240	Biosynthesis of cofactors	5
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	4
bra03040	Spliceosome	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo01240	Biosynthesis of cofactors	3
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	3
ghi00630	Glyoxylate and dicarboxylate metabolism	3
ghi00670	One carbon pool by folate	3
ghi00785	Lipoic acid metabolism	3
ghi01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4
ghi01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	7
bna00053	Ascorbate and aldarate metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	4
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	6
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00195	Photosynthesis	3
cre01240	Biosynthesis of cofactors	2
cre00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	2
cre00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100830255

123091533

123096494

123086461

123448068

4349608

4351322

100285955

8074861

820021

100500109

100306051

101263649

103870595

103847515

100241479

7472473

11427259

107941819

107928436

106402234

106436324

106452838

102594735

102627463

107801762

107827635

5724837

66056806

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100830255 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830255 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	2	1	1	1	2	1	2	1	1	1	2	3	1	1	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100830255 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830255 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**