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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500109   uncharacterized LOC100500109 
 gma-r.7   100500109   uncharacterized LOC100500109 
 gma-m.5   100500109   uncharacterized LOC100500109 
 gma-u.5   100306051   elongation factor P 
 mtr-u.5   11427259   elongation factor P 
 ppo-u.5   7472473   uncharacterized LOC7472473 
 ath-u.5   AT3G08740   elongation factor P (EF-P) family protein 
 bra-r.6   103870595   elongation factor P 
 bra-r.6   103847515   elongation factor P 
 vvi-u.5   100241479   uncharacterized LOC100241479 
 ghi-r.1   107928436   elongation factor P 
 ghi-r.1   107941819   elongation factor P 
 bna-r.1   106402234   elongation factor P 
 bna-r.1   106436324   elongation factor P-like 
 bna-r.1   106452838   elongation factor P 
 cit-r.1   102627463   uncharacterized LOC102627463 
 sly-u.5   101263649   uncharacterized LOC101263649 
 sot-r.1   102594735   elongation factor P 
 nta-r.1   107801762   uncharacterized LOC107801762 
 nta-r.1   107827635   uncharacterized LOC107827635 
 osa-u.5   4349608   uncharacterized LOC4349608 
 osa-u.5   4351322   uncharacterized LOC4351322 
 zma-u.5   100285955   uncharacterized LOC100285955 
 tae-r.2   123091533   elongation factor P 
 tae-r.2   123096494   elongation factor P 
 tae-r.2   123086461   elongation factor P 
 hvu-r.1   123448068   elongation factor P 
 sbi-r.1   8074861   elongation factor P 
 bdi-r.1   100830255   elongation factor P 
 cre-r.1   CHLRE_16g691000v5   uncharacterized protein 
 cre-r.1   CHLRE_16g690800v5   uncharacterized protein 

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Top 50 coexpressed genes to 100500109 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500109 (gma-u.5 coexpression data)

CoexMap"100500109"


gmaLOC100500109 | Entrez gene ID : 100500109      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 2 3 1 1 1 2 2 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043043 [list] [network] peptide biosynthetic process  (12 genes)  IEA  
GO:0006414 [list] [network] translational elongation  (65 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (46 genes)  IEA  
Protein NP_001236933.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for NP_001236933.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001236933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500109
gma-r.7
for
100500109
gma-m.5
for
100500109
gma-u.5
for
100306051
mtr-u.5
for
11427259
ppo-u.5
for
7472473
ath-u.5
for
AT3G08740
bra-r.6
for
103870595
bra-r.6
for
103847515
vvi-u.5
for
100241479
ghi-r.1
for
107928436
ghi-r.1
for
107941819
bna-r.1
for
106402234
bna-r.1
for
106436324
bna-r.1
for
106452838
cit-r.1
for
102627463
sly-u.5
for
101263649
sot-r.1
for
102594735
nta-r.1
for
107801762
nta-r.1
for
107827635
osa-u.5
for
4349608
osa-u.5
for
4351322
zma-u.5
for
100285955
tae-r.2
for
123091533
tae-r.2
for
123096494
tae-r.2
for
123086461
hvu-r.1
for
123448068
sbi-r.1
for
8074861
bdi-r.1
for
100830255
cre-r.1
for
CHLRE_16g691000v5
cre-r.1
for
CHLRE_16g690800v5


Ortholog ID: 7985
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna bna cit sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC100500109 LOC100306051 LOC11427259 LOC7472473 AT3G08740 LOC103870595 LOC103847515 LOC100241479 LOC107928436 LOC107941819 LOC106402234 LOC106436324 LOC106452838 LOC102627463 LOC101263649 LOC102594735 LOC107801762 LOC107827635 LOC4349608 LOC4351322 LOC100285955 LOC123091533 LOC123096494 LOC123086461 LOC123448068 LOC8074861 LOC100830255 CHLRE_16g691000v5 CHLRE_16g690800v5
Function* uncharacterized LOC100500109 elongation factor P elongation factor P uncharacterized LOC7472473 elongation factor P (EF-P) family protein elongation factor P elongation factor P uncharacterized LOC100241479 elongation factor P elongation factor P elongation factor P elongation factor P-like elongation factor P uncharacterized LOC102627463 uncharacterized LOC101263649 elongation factor P uncharacterized LOC107801762 uncharacterized LOC107827635 uncharacterized LOC4349608 uncharacterized LOC4351322 uncharacterized LOC100285955 elongation factor P elongation factor P elongation factor P elongation factor P elongation factor P elongation factor P uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00860 Porphyrin metabolism 5
gma01240 Biosynthesis of cofactors 5
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi00785 Lipoic acid metabolism 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 7
bna00053 Ascorbate and aldarate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 4
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 3
cre01240 Biosynthesis of cofactors 2
cre00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100500109 100306051 11427259 7472473 820021 103870595 103847515 100241479 107928436 107941819 106402234 106436324 106452838 102627463 101263649 102594735 107801762 107827635 4349608 4351322 100285955 123091533 123096494 123086461 123448068 8074861 100830255 5724837 66056806
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