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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100831734   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 tae-r.2   123058519   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 hvu-r.1   123440243   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 hvu-r.1   123441405   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like 
 osa-u.5   4326177   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 osa-u.5   4327933   carotenoid cleavage dioxygenase 8 homolog A, chloroplastic-like 
 zma-u.5   100502522   uncharacterized LOC100502522 
 sbi-r.1   8062181   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 ath-u.5   CCD8   carotenoid cleavage dioxygenase 8 
 gma-u.5   100814148   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 gma-u.5   CCD8   carotenoid cleavage dioxygenase 
 sly-u.5   101254620   carotenoid cleavage dioxygenase 8, chloroplastic-like 
 bra-r.6   103850421   carotenoid cleavage dioxygenase 8, chloroplastic 
 vvi-u.5   100250765   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 ppo-u.5   7462922   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 ppo-u.5   7470743   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 mtr-u.5   11423389   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 mtr-u.5   25498599   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 ghi-r.1   107953845   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 ghi-r.1   107901528   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 ghi-r.1   107900521   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 bna-r.1   106375326   carotenoid cleavage dioxygenase 8, chloroplastic 
 bna-r.1   106371158   carotenoid cleavage dioxygenase 8, chloroplastic-like 
 sot-r.1   102595155   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 nta-r.1   107821949   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic 
 nta-r.1   107812793   carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like 
 cre-r.1   CHLRE_02g073900v5   uncharacterized protein 
 cre-r.1   CHLRE_08g365851v5   uncharacterized protein 
 cre-r.1   CHLRE_02g073950v5   uncharacterized protein 

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Top 50 coexpressed genes to 100831734 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100831734 (bdi-r.1 coexpression data)

CoexMap"100831734"


bdiLOC100831734 | Entrez gene ID : 100831734      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot nta cre cit
Paralog 1 1 2 2 1 1 1 2 1 1 1 2 2 3 2 1 2 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00906 [list] [network] Carotenoid biosynthesis (35 genes)
GO BP
GO:0016121 [list] [network] carotene catabolic process  (11 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (552 genes)  IEA  
GO MF
GO:0010436 [list] [network] carotenoid dioxygenase activity  (11 genes)  IEA  
Protein XP_003569798.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003569798.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003569798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100831734
tae-r.2
for
123058519
hvu-r.1
for
123440243
hvu-r.1
for
123441405
osa-u.5
for
4326177
osa-u.5
for
4327933
zma-u.5
for
100502522
sbi-r.1
for
8062181
ath-u.5
for
CCD8
gma-u.5
for
100814148
gma-u.5
for
CCD8
sly-u.5
for
101254620
bra-r.6
for
103850421
vvi-u.5
for
100250765
ppo-u.5
for
7462922
ppo-u.5
for
7470743
mtr-u.5
for
11423389
mtr-u.5
for
25498599
ghi-r.1
for
107953845
ghi-r.1
for
107901528
ghi-r.1
for
107900521
bna-r.1
for
106375326
bna-r.1
for
106371158
sot-r.1
for
102595155
nta-r.1
for
107821949
nta-r.1
for
107812793
cre-r.1
for
CHLRE_02g073900v5
cre-r.1
for
CHLRE_08g365851v5
cre-r.1
for
CHLRE_02g073950v5


Ortholog ID: 4963
Species bdi tae tae hvu hvu osa osa zma sbi ath gma gma sly bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna sot nta nta cre cre cre
Symbol LOC100831734 LOC123058519 LOC123065607 LOC123440243 LOC123441405 LOC4326177 LOC4327933 LOC100502522 LOC8062181 CCD8 LOC100814148 CCD8 LOC101254620 LOC103850421 LOC100250765 LOC7462922 LOC7470743 LOC11423389 LOC25498599 LOC107901528 LOC107900521 LOC107897099 LOC106375326 LOC106371158 LOC102595155 LOC107821949 LOC107812793 CHLRE_02g073900v5 CHLRE_08g365851v5 CHLRE_02g073950v5
Function* carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog A, chloroplastic-like uncharacterized LOC100502522 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase carotenoid cleavage dioxygenase 8, chloroplastic-like carotenoid cleavage dioxygenase 8, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8, chloroplastic carotenoid cleavage dioxygenase 8, chloroplastic-like carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00330 Arginine and proline metabolism 3
bdi00480 Glutathione metabolism 3
bdi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
hvu00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00250 Alanine, aspartate and glutamate metabolism 3
osa00270 Cysteine and methionine metabolism 2
osa01200 Carbon metabolism 2
osa00906 Carotenoid biosynthesis 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00904 Diterpenoid biosynthesis 3
zma02010 ABC transporters 2
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 3
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 10
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 5
mtr00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
nta00410 beta-Alanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
nta00410 beta-Alanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00071 Fatty acid degradation 2
cre01212 Fatty acid metabolism 2
cre04146 Peroxisome 2
cre00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100831734 123058519 123065607 123440243 123441405 4326177 4327933 100502522 8062181 829417 100814148 100794831 101254620 103850421 100250765 7462922 7470743 11423389 25498599 107901528 107900521 107897099 106375326 106371158 102595155 107821949 107812793 5727168 5721657 5727169
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