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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100832200   uncharacterized LOC100832200 
 tae-r.2   123120357   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 tae-r.2   123111374   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 tae-r.2   123103184   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 hvu-r.1   123397807   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 osa-u.5   4349577   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 osa-u.5   4351293   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 zma-u.5   100273953   plastid transcriptionally active 6 
 sbi-r.1   8067595   uncharacterized LOC8067595 
 ath-u.5   PTAC6   plastid transcriptionally active 6 
 gma-u.5   100792016   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 gma-u.5   100782614   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 sly-u.5   101249346   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 bra-r.6   103873001   uncharacterized LOC103873001 
 bra-r.6   103835739   uncharacterized LOC103835739 
 vvi-u.5   100250482   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 ppo-u.5   7467864   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 mtr-u.5   25489706   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 ghi-r.1   107951492   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 ghi-r.1   107910367   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 bna-r.1   BNAC05G16910D   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 bna-r.1   106347369   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 bna-r.1   106425901   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 sot-r.1   102599847   uncharacterized LOC102599847 
 cit-r.1   102626178   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 nta-r.1   107789386   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic 
 nta-r.1   107760033   PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic-like 

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Top 50 coexpressed genes to 100832200 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100832200 (bdi-r.1 coexpression data)

CoexMap"100832200"


bdiLOC100832200 | Entrez gene ID : 100832200      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 2 1 1 1 2 1 2 1 1 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (4 genes)  IEA  
GO MF
Protein XP_003579035.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003579035.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003579035.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100832200
tae-r.2
for
123120357
tae-r.2
for
123111374
tae-r.2
for
123103184
hvu-r.1
for
123397807
osa-u.5
for
4349577
osa-u.5
for
4351293
zma-u.5
for
100273953
sbi-r.1
for
8067595
ath-u.5
for
PTAC6
gma-u.5
for
100792016
gma-u.5
for
100782614
sly-u.5
for
101249346
bra-r.6
for
103873001
bra-r.6
for
103835739
vvi-u.5
for
100250482
ppo-u.5
for
7467864
mtr-u.5
for
25489706
ghi-r.1
for
107951492
ghi-r.1
for
107910367
bna-r.1
for
BNAC05G16910D
bna-r.1
for
106347369
bna-r.1
for
106425901
sot-r.1
for
102599847
cit-r.1
for
102626178
nta-r.1
for
107789386
nta-r.1
for
107760033


Ortholog ID: 9222
Species bdi tae tae tae hvu osa osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100832200 LOC123120357 LOC123111374 LOC123103184 LOC123397807 LOC4349577 LOC4351293 LOC100273953 LOC8067595 PTAC6 LOC100792016 LOC100782614 LOC101249346 LOC103873001 LOC103835739 LOC100250482 LOC7467864 LOC25489706 LOC107951492 LOC107910367 BNAC05G16910D LOC106347369 LOC106425901 LOC102599847 LOC102626178 LOC107789386 LOC107760033
Function* uncharacterized LOC100832200 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic plastid transcriptionally active 6 uncharacterized LOC8067595 plastid transcriptionally active 6 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic uncharacterized LOC103873001 uncharacterized LOC103835739 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic uncharacterized LOC102599847 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03060 Protein export 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100832200 123120357 123111374 123103184 123397807 4349577 4351293 100273953 8067595 838761 100792016 100782614 101249346 103873001 103835739 100250482 7467864 25489706 107951492 107910367 106401601 106347369 106425901 102599847 102626178 107789386 107760033
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