ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100836340	uncharacterized LOC100836340
bdi-r.1	104581847	uncharacterized LOC104581847
tae-r.2	123070897	uncharacterized LOC123070897
tae-r.2	123079283	uncharacterized LOC123079283
tae-r.2	123062168	uncharacterized LOC123062168
hvu-r.1	123444503	uncharacterized LOC123444503
hvu-r.1	123449411	uncharacterized LOC123449411
osa-u.5	4324837	uncharacterized LOC4324837
osa-u.5	4352047	uncharacterized LOC4352047
zma-u.5	100285562	glycosyl hydrolase, family 43 protein
zma-u.5	103650927	Arabinanase/levansucrase/invertase
zma-u.5	103639465	Arabinanase/levansucrase/invertase
sbi-r.1	8061013	uncharacterized LOC8061013
sbi-r.1	8054238	uncharacterized LOC8054238
ath-u.5	AT3G49880	glycosyl hydrolase family protein 43
ath-u.5	AT5G67540	Arabinanase/levansucrase/invertase
gma-u.5	100813539	uncharacterized LOC100813539
gma-u.5	100775557	uncharacterized LOC100775557
gma-u.5	100782607	uncharacterized LOC100782607
sly-u.5	101262370	uncharacterized LOC101262370
bra-r.6	103827719	uncharacterized LOC103827719
bra-r.6	103874047	uncharacterized LOC103874047
bra-r.6	103840910	uncharacterized LOC103840910
vvi-u.5	100854050	uncharacterized LOC100854050
ppo-u.5	7476438	uncharacterized LOC7476438
mtr-u.5	11428468	uncharacterized LOC11428468
ghi-r.1	107932582	uncharacterized LOC107932582
ghi-r.1	107922443	uncharacterized LOC107922443
ghi-r.1	107924392	uncharacterized LOC107924392
bna-r.1	BNAC08G21450D	uncharacterized BNAC08G21450D
bna-r.1	106348161	uncharacterized LOC106348161
bna-r.1	BNAANNG03950D	uncharacterized BNAANNG03950D
sot-r.1	102593325	uncharacterized LOC102593325
sot-r.1	102597099	uncharacterized LOC102597099
cit-r.1	102623877	uncharacterized LOC102623877
nta-r.1	107791637	uncharacterized LOC107791637
nta-r.1	107797220	uncharacterized LOC107797220

Top 50 coexpressed genes to 100836340 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100836340 (bdi-r.1 coexpression data)

CoexMap"100836340"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(658 genes)

IEA

GO CC

GO MF

GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds

(357 genes)

IEA

Protein

XP_003569898.2 [sequence] [blastp]
XP_010232386.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, extr 2, nucl 1, cyto 1, mito 1, plas 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_003569898.2)
chlo 7, mito 1, E.R. 1	(predict for XP_010232386.1)

Subcellular
localization
TargetP

chlo 3	(predict for XP_003569898.2)
other 8, mito 5	(predict for XP_010232386.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100836340	bdi-r.1 for 104581847	tae-r.2 for 123070897	tae-r.2 for 123079283	tae-r.2 for 123062168	hvu-r.1 for 123444503	hvu-r.1 for 123449411	osa-u.5 for 4324837	osa-u.5 for 4352047	zma-u.5 for 100285562	zma-u.5 for 103650927	zma-u.5 for 103639465	sbi-r.1 for 8061013	sbi-r.1 for 8054238	ath-u.5 for AT3G49880	ath-u.5 for AT5G67540	gma-u.5 for 100813539	gma-u.5 for 100775557	gma-u.5 for 100782607	sly-u.5 for 101262370	bra-r.6 for 103827719	bra-r.6 for 103874047	bra-r.6 for 103840910	vvi-u.5 for 100854050	ppo-u.5 for 7476438	mtr-u.5 for 11428468	ghi-r.1 for 107932582	ghi-r.1 for 107922443	ghi-r.1 for 107924392	bna-r.1 for BNAC08G21450D	bna-r.1 for 106348161	bna-r.1 for BNAANNG03950D	sot-r.1 for 102593325	sot-r.1 for 102597099	cit-r.1 for 102623877	nta-r.1 for 107791637	nta-r.1 for 107797220

Ortholog

Ortholog ID: 3944

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100836340

uncharacterized LOC104581847

uncharacterized LOC123093094

uncharacterized LOC123098372

uncharacterized LOC123444503

uncharacterized LOC123449411

uncharacterized LOC4324837

uncharacterized LOC4352047

glycosyl hydrolase, family 43 protein

Arabinanase/levansucrase/invertase

uncharacterized LOC8061013

uncharacterized LOC8054238

glycosyl hydrolase family protein 43

Arabinanase/levansucrase/invertase

uncharacterized LOC100813539

uncharacterized LOC100775557

uncharacterized LOC100782607

uncharacterized LOC101262370

uncharacterized LOC103827719

uncharacterized LOC103874047

uncharacterized LOC103840910

uncharacterized LOC100854050

uncharacterized LOC7476438

uncharacterized LOC11428468

uncharacterized LOC107932582

uncharacterized LOC107922443

uncharacterized LOC107924392

uncharacterized BNAC08G21450D

uncharacterized BNAANNG03950D

uncharacterized LOC106443815

uncharacterized LOC102593325

uncharacterized LOC102597099

uncharacterized LOC102623877

uncharacterized LOC107791637

uncharacterized LOC107822725

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	7
bdi00510	N-Glycan biosynthesis	4
bdi00513	Various types of N-glycan biosynthesis	4
bdi03060	Protein export	3
bdi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00620	Pyruvate metabolism	3
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae00640	Propanoate metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2
tae00620	Pyruvate metabolism	2
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae00640	Propanoate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	3
hvu01200	Carbon metabolism	3
hvu01240	Biosynthesis of cofactors	2
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2
zma00040	Pentose and glucuronate interconversions	2
zma00052	Galactose metabolism	2
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03410	Base excision repair	2
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	4
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr00220	Arginine biosynthesis	2
mtr01210	2-Oxocarboxylic acid metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00513	Various types of N-glycan biosynthesis	3
cit04141	Protein processing in endoplasmic reticulum	3
cit00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00592	alpha-Linolenic acid metabolism	2
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

100836340

104581847

123093094

123098372

123444503

123449411

4324837

4352047

100285562

103650927

103639465

8061013

8054238

824150

836890

100813539

100775557

100782607

101262370

103827719

103874047

103840910

100854050

7476438

11428468

107932582

107922443

107924392

106451220

106390884

106443815

102593325

102597099

102623877

107791637

107822725

The preparation time of this page was 0.1 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	3	2	2	3	1	3	1	1	1	3	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100836340 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100836340 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**