ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100842014	uncharacterized LOC100842014
bdi-r.1	100828011	uncharacterized LOC100828011
tae-r.2	123148320	uncharacterized LOC123148320
tae-r.2	123180407	uncharacterized LOC123180407
tae-r.2	123190911	uncharacterized LOC123190911
hvu-r.1	123424569	uncharacterized LOC123424569
hvu-r.1	123411910	uncharacterized LOC123411910
osa-u.5	4329709	uncharacterized LOC4329709
osa-u.5	4341599	uncharacterized LOC4341599
zma-u.5	100216686	F11F12.5 protein
zma-u.5	100275775	uncharacterized LOC100275775
zma-u.5	103628708	uncharacterized LOC103628708
sbi-r.1	8067683	uncharacterized LOC8067683
sbi-r.1	8068922	uncharacterized LOC8068922
ath-u.5	AT3G20300	extracellular ligand-gated ion channel protein (DUF3537)
ath-u.5	MRB1	transmembrane protein, putative (DUF3537)
ath-u.5	AT1G50630	extracellular ligand-gated ion channel protein (DUF3537)
gma-u.5	100809035	uncharacterized LOC100809035
gma-u.5	100816572	uncharacterized LOC100816572
sly-u.5	101243767	uncharacterized LOC101243767
sly-u.5	101266537	uncharacterized LOC101266537
sly-u.5	101267356	uncharacterized LOC101267356
bra-r.6	103859918	uncharacterized LOC103859918
bra-r.6	103871333	uncharacterized LOC103871333
vvi-u.5	100245205	uncharacterized LOC100245205
ppo-u.5	7478701	uncharacterized LOC7478701
mtr-u.5	11443885	uncharacterized LOC11443885
mtr-u.5	25489025	uncharacterized LOC25489025
ghi-r.1	107918196	uncharacterized LOC107918196
ghi-r.1	107925294	uncharacterized LOC107925294
ghi-r.1	107932714	uncharacterized LOC107932714
bna-r.1	106420844	uncharacterized LOC106420844
bna-r.1	BNAC05G31730D	uncharacterized BNAC05G31730D
bna-r.1	BNAC03G41510D	uncharacterized BNAC03G41510D
sot-r.1	102602141	uncharacterized LOC102602141
sot-r.1	102588767	uncharacterized LOC102588767
sot-r.1	102597876	uncharacterized LOC102597876
cit-r.1	102610018	hypothetical protein
cit-r.1	102613657	hypothetical protein
nta-r.1	107813774	uncharacterized LOC107813774
nta-r.1	107776770	uncharacterized LOC107776770
nta-r.1	107773998	uncharacterized LOC107773998

Top 50 coexpressed genes to 100842014 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100842014 (bdi-r.1 coexpression data)

CoexMap"100842014"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003563581.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, mito 1, plas 1, vacu 1, nucl_plas 1, mito_plas 1

(predict for XP_003563581.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003563581.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100842014	bdi-r.1 for 100828011	tae-r.2 for 123148320	tae-r.2 for 123180407	tae-r.2 for 123190911	hvu-r.1 for 123424569	hvu-r.1 for 123411910	osa-u.5 for 4329709	osa-u.5 for 4341599	zma-u.5 for 100216686	zma-u.5 for 100275775	zma-u.5 for 103628708	sbi-r.1 for 8067683	sbi-r.1 for 8068922	ath-u.5 for AT3G20300	ath-u.5 for MRB1	ath-u.5 for AT1G50630	gma-u.5 for 100809035	gma-u.5 for 100816572	sly-u.5 for 101243767	sly-u.5 for 101266537	sly-u.5 for 101267356	bra-r.6 for 103859918	bra-r.6 for 103871333	vvi-u.5 for 100245205	ppo-u.5 for 7478701	mtr-u.5 for 11443885	mtr-u.5 for 25489025	ghi-r.1 for 107918196	ghi-r.1 for 107925294	ghi-r.1 for 107932714	bna-r.1 for 106420844	bna-r.1 for BNAC05G31730D	bna-r.1 for BNAC03G41510D	sot-r.1 for 102602141	sot-r.1 for 102588767	sot-r.1 for 102597876	cit-r.1 for 102610018	cit-r.1 for 102613657	nta-r.1 for 107813774	nta-r.1 for 107776770	nta-r.1 for 107773998

Ortholog

Ortholog ID: 1392

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

MRB1

Function^*

uncharacterized LOC100842014

uncharacterized LOC100828011

uncharacterized LOC123148320

uncharacterized LOC123180407

uncharacterized LOC123424569

uncharacterized LOC123411910

uncharacterized LOC4329709

uncharacterized LOC4341599

F11F12.5 protein

uncharacterized LOC100275775

uncharacterized LOC103628708

uncharacterized LOC8067683

uncharacterized LOC8068922

extracellular ligand-gated ion channel protein (DUF3537)

transmembrane protein, putative (DUF3537)

extracellular ligand-gated ion channel protein (DUF3537)

uncharacterized LOC100809035

uncharacterized LOC100816572

uncharacterized LOC101243767

uncharacterized LOC101266537

uncharacterized LOC101267356

uncharacterized LOC103871333

uncharacterized LOC103861292

uncharacterized LOC103859848

uncharacterized LOC100245205

uncharacterized LOC7478701

uncharacterized LOC11443885

uncharacterized LOC25489025

uncharacterized LOC107918196

uncharacterized LOC107925294

uncharacterized LOC107932714

uncharacterized LOC106357506

uncharacterized LOC106399274

uncharacterized BNAC01G13780D

uncharacterized LOC102602141

uncharacterized LOC102588767

uncharacterized LOC102604757

hypothetical protein

uncharacterized LOC107776770

uncharacterized LOC107773998

uncharacterized LOC107759973

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01040	Biosynthesis of unsaturated fatty acids	2
bdi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	3
tae00740	Riboflavin metabolism	2
tae00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma04075	Plant hormone signal transduction	3
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	4
zma00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	2
ath00562	Inositol phosphate metabolism	2
ath04070	Phosphatidylinositol signaling system	2
ath00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra01200	Carbon metabolism	3
bra00020	Citrate cycle (TCA cycle)	2
bra00270	Cysteine and methionine metabolism	2
bra00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00910	Nitrogen metabolism	3
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	4
ghi01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	7
ghi03018	RNA degradation	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	3
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot04141	Protein processing in endoplasmic reticulum	3
sot04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	6
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit01040	Biosynthesis of unsaturated fatty acids	2
cit01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	5
nta04075	Plant hormone signal transduction	5
nta04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

100842014

100828011

123148320

123180407

123424569

123411910

4329709

4341599

100216686

100275775

103628708

8067683

8068922

821574

828322

841485

100809035

100816572

101243767

101266537

101267356

103871333

103861292

103859848

100245205

7478701

11443885

25489025

107918196

107925294

107932714

106357506

106399274

106437634

102602141

102588767

102604757

102610018

102613657

107776770

107773998

107759973

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	3	2	3	2	3	2	1	1	2	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100842014 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100842014 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**