ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100844989	probable RNA-dependent RNA polymerase 1
tae-r.2	123145431	probable RNA-dependent RNA polymerase 1
tae-r.2	123138176	probable RNA-dependent RNA polymerase 1
tae-r.2	123138175	probable RNA-dependent RNA polymerase 1
hvu-r.1	123401198	probable RNA-dependent RNA polymerase 1
hvu-r.1	123403439	probable RNA-dependent RNA polymerase 1
osa-u.5	4330655	probable RNA-dependent RNA polymerase 1
zma-u.5	100502529	uncharacterized LOC100502529
sbi-r.1	8075746	probable RNA-dependent RNA polymerase 1
ath-u.5	RDR1	RNA-dependent RNA polymerase 1
gma-u.5	100811587	RNA-dependent RNA polymerase 1
sly-u.5	RdRP	RNA-directed RNA polymerase
bra-r.6	103872274	RNA-dependent RNA polymerase 1
vvi-u.5	100262811	probable RNA-dependent RNA polymerase 1
vvi-u.5	100268011	probable RNA-dependent RNA polymerase 1
ppo-u.5	7459099	probable RNA-dependent RNA polymerase 1
ppo-u.5	18109877	probable RNA-dependent RNA polymerase 1
ppo-u.5	7457809	RNA-dependent RNA polymerase 1
mtr-u.5	25482568	RNA-dependent RNA polymerase 1
mtr-u.5	25482564	RNA-dependent RNA polymerase 1
mtr-u.5	25482562	RNA-dependent RNA polymerase 1
ghi-r.1	107913503	RNA-dependent RNA polymerase 1-like
ghi-r.1	107920197	RNA-dependent RNA polymerase 1
bna-r.1	106400784	RNA-dependent RNA polymerase 1
bna-r.1	106346610	RNA-dependent RNA polymerase 1
sot-r.1	107059453	RNA-dependent RNA polymerase 1-like
sot-r.1	102578970	probable RNA-dependent RNA polymerase 1
sot-r.1	102578633	probable RNA-dependent RNA polymerase 1
cit-r.1	102606638	probable RNA-dependent RNA polymerase 1
cit-r.1	102610690	probable RNA-dependent RNA polymerase 1
cit-r.1	102611575	probable RNA-dependent RNA polymerase 1
nta-r.1	107827981	putative RNA-dependent RNA polymerase 1
nta-r.1	107788900	putative RNA-dependent RNA polymerase 1

Annotation

functional annotation

KEGG

GO BP

GO:0030422 [list] [network] siRNA processing

(17 genes)

IEA

GO CC

GO:0031380 [list] [network] nuclear RNA-directed RNA polymerase complex

(5 genes)

IEA

GO MF

GO:0003968 [list] [network] RNA-directed RNA polymerase activity	(5 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1239 genes)	IEA

Protein

XP_010236147.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, chlo 2, cyto 2, pero 1, vacu 1, cysk_plas 1

(predict for XP_010236147.1)

Subcellular
localization
TargetP

other 8

(predict for XP_010236147.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100844989	tae-r.2 for 123145431	tae-r.2 for 123138176	tae-r.2 for 123138175	hvu-r.1 for 123401198	hvu-r.1 for 123403439	osa-u.5 for 4330655	zma-u.5 for 100502529	sbi-r.1 for 8075746	ath-u.5 for RDR1	gma-u.5 for 100811587	sly-u.5 for RdRP	bra-r.6 for 103872274	vvi-u.5 for 100262811	vvi-u.5 for 100268011	ppo-u.5 for 7459099	ppo-u.5 for 18109877	ppo-u.5 for 7457809	mtr-u.5 for 25482568	mtr-u.5 for 25482564	mtr-u.5 for 25482562	ghi-r.1 for 107913503	ghi-r.1 for 107920197	bna-r.1 for 106400784	bna-r.1 for 106346610	sot-r.1 for 107059453	sot-r.1 for 102578970	sot-r.1 for 102578633	cit-r.1 for 102606638	cit-r.1 for 102610690	cit-r.1 for 102611575	nta-r.1 for 107827981	nta-r.1 for 107788900

Ortholog

Ortholog ID: 5407

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

RDR1

RdRP

Function^*