ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	104581871	UPF0503 protein At3g09070, chloroplastic-like
bdi-r.1	100842841	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	100828984	UPF0503 protein At3g09070, chloroplastic
tae-r.2	123135487	protein OCTOPUS
tae-r.2	123079777	protein OCTOPUS
tae-r.2	123086303	protein OCTOPUS
hvu-r.1	123448226	protein OCTOPUS-like
hvu-r.1	123415280	protein OCTOPUS-like
hvu-r.1	123440523	protein OCTOPUS-like
osa-u.5	9267710	protein OCTOPUS
osa-u.5	4324814	protein OCTOPUS
osa-u.5	4338959	protein OCTOPUS
zma-u.5	103651003	protein OCTOPUS
zma-u.5	103635597	protein OCTOPUS
zma-u.5	103630391	protein OCTOPUS
sbi-r.1	8061749	UPF0503 protein At3g09070, chloroplastic
sbi-r.1	8060107	UPF0503 protein At3g09070, chloroplastic
ath-u.5	AT2G38070	LOW protein: UPF0503-like protein, putative (DUF740)
ath-u.5	OPS	LOW protein: UPF0503-like protein, putative (DUF740)
ath-u.5	AT5G01170	hypothetical protein (DUF740)
gma-u.5	100807102	protein OCTOPUS
gma-u.5	100799446	protein OCTOPUS
sly-u.5	101243925	uncharacterized LOC101243925
sly-u.5	101256822	protein OCTOPUS
bra-r.6	103865648	protein OCTOPUS
bra-r.6	103859310	protein OCTOPUS
bra-r.6	103848299	protein OCTOPUS
vvi-u.5	100251888	protein OCTOPUS
vvi-u.5	100263034	protein OCTOPUS
ppo-u.5	7466049	protein OCTOPUS
ppo-u.5	7487297	protein OCTOPUS
mtr-u.5	25498706	protein OCTOPUS
ghi-r.1	107930147	protein OCTOPUS
ghi-r.1	107905645	protein OCTOPUS
ghi-r.1	107899040	protein OCTOPUS
bna-r.1	106352984	protein OCTOPUS-like
bna-r.1	106403134	protein OCTOPUS
sot-r.1	102579926	UPF0503 protein At3g09070, chloroplastic-like
sot-r.1	102583781	UPF0503 protein At3g09070, chloroplastic-like
nta-r.1	107789019	protein OCTOPUS-like
nta-r.1	107785701	protein OCTOPUS-like
nta-r.1	107782953	protein OCTOPUS-like

Top 50 coexpressed genes to 104581871 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 104581871 (bdi-r.1 coexpression data)

CoexMap"104581871"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024312862.1 [sequence] [blastp]
XP_024312863.1 [sequence] [blastp]
XP_024312864.1 [sequence] [blastp]
XP_024312866.1 [sequence] [blastp]
XP_024312867.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_024312862.1)
nucl 10	(predict for XP_024312863.1)
nucl 10	(predict for XP_024312864.1)
nucl 10	(predict for XP_024312866.1)
nucl 10	(predict for XP_024312867.1)

Subcellular
localization
TargetP

chlo 4, other 4	(predict for XP_024312862.1)
chlo 4, other 4	(predict for XP_024312863.1)
chlo 4, other 4	(predict for XP_024312864.1)
chlo 4, other 4	(predict for XP_024312866.1)
chlo 4, other 4	(predict for XP_024312867.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 104581871	bdi-r.1 for 100842841	bdi-r.1 for 100828984	tae-r.2 for 123135487	tae-r.2 for 123079777	tae-r.2 for 123086303	hvu-r.1 for 123448226	hvu-r.1 for 123415280	hvu-r.1 for 123440523	osa-u.5 for 9267710	osa-u.5 for 4324814	osa-u.5 for 4338959	zma-u.5 for 103651003	zma-u.5 for 103635597	zma-u.5 for 103630391	sbi-r.1 for 8061749	sbi-r.1 for 8060107	ath-u.5 for AT2G38070	ath-u.5 for OPS	ath-u.5 for AT5G01170	gma-u.5 for 100807102	gma-u.5 for 100799446	sly-u.5 for 101243925	sly-u.5 for 101256822	bra-r.6 for 103865648	bra-r.6 for 103859310	bra-r.6 for 103848299	vvi-u.5 for 100251888	vvi-u.5 for 100263034	ppo-u.5 for 7466049	ppo-u.5 for 7487297	mtr-u.5 for 25498706	ghi-r.1 for 107930147	ghi-r.1 for 107905645	ghi-r.1 for 107899040	bna-r.1 for 106352984	bna-r.1 for 106403134	sot-r.1 for 102579926	sot-r.1 for 102583781	nta-r.1 for 107789019	nta-r.1 for 107785701	nta-r.1 for 107782953

Ortholog

Ortholog ID: 2325

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

nta

Symbol

OPS

Function^*

UPF0503 protein At3g09070, chloroplastic-like

UPF0503 protein At3g09070, chloroplastic

protein OCTOPUS

protein OCTOPUS-like

protein OCTOPUS

uncharacterized LOC100217015

UPF0503 protein At3g09070, chloroplastic

LOW protein: UPF0503-like protein, putative (DUF740)

hypothetical protein (DUF740)

protein OCTOPUS

uncharacterized LOC101243925

protein OCTOPUS

protein OCTOPUS-like

protein OCTOPUS

protein OCTOPUS-like

protein OCTOPUS

protein OCTOPUS-like

UPF0503 protein At3g09070, chloroplastic-like

protein OCTOPUS-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	5
sbi04517	IgSF CAM signaling	5
sbi04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

104581871

100842841

100828984

123079777

123062620

123091739

123448226

123415280

123440523

9267710

4324814

4338959

103635597

103630391

100217015

8061749

8060107

818385

820060

831732

100807102

100799446

101243925

101256822

103865648

103848299

103847495

100251888

100263034

7466049

7487297

25498706

107930147

107905645

107958036

106435870

106439216

106447655

102579926

102583781

107789019

107782953

107811433

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Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	nta	cre	cit
Paralog	3	3	3	3	3	2	3	2	2	3	2	2	1	3	2	2	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 104581871 (bdi-r.1 coexpression data)

Top 50 enrichment test to 104581871 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**