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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102611082   uncharacterized LOC102611082 
 ath-u.5   AT5G07810   SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein 
 bra-r.6   103855745   DNA annealing helicase and endonuclease ZRANB3 
 ghi-r.1   107949799   DNA annealing helicase and endonuclease ZRANB3 
 ghi-r.1   107887837   DNA annealing helicase and endonuclease ZRANB3 
 bna-r.1   106385009   DNA annealing helicase and endonuclease ZRANB3 
 bna-r.1   106384999   DNA annealing helicase and endonuclease ZRANB3 
 gma-u.5   100788690   DNA annealing helicase and endonuclease ZRANB3 
 vvi-u.5   100267344   uncharacterized LOC100267344 
 ppo-u.5   7487130   uncharacterized LOC7487130 
 mtr-u.5   120579634   DNA annealing helicase and endonuclease ZRANB3 
 sly-u.5   101263803   uncharacterized LOC101263803 
 sot-r.1   102603029   DNA annealing helicase and endonuclease ZRANB3 
 nta-r.1   107811423   uncharacterized LOC107811423 
 nta-r.1   107787482   uncharacterized LOC107787482 
 osa-u.5   4343803   uncharacterized LOC4343803 
 zma-u.5   100277497   uncharacterized LOC100277497 
 tae-r.2   123044330   DNA annealing helicase and endonuclease ZRANB3 
 tae-r.2   123188058   DNA annealing helicase and endonuclease ZRANB3 
 tae-r.2   123052193   DNA annealing helicase and endonuclease ZRANB3 
 hvu-r.1   123425439   DNA annealing helicase and endonuclease ZRANB3 
 bdi-r.1   100832506   DNA annealing helicase and endonuclease ZRANB3 

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Top 50 coexpressed genes to 102611082 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102611082 (cit-r.1 coexpression data)

CoexMap"102611082"


citLOC102611082 | Entrez gene ID : 102611082    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu bdi sbi cre
Paralog 1 1 1 2 2 1 1 1 1 1 1 2 1 1 3 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031297 [list] [network] replication fork processing  (9 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (225 genes)  IEA  
GO CC
GO:0043596 [list] [network] nuclear replication fork  (20 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (33 genes)  IEA  
GO:0004519 [list] [network] endonuclease activity  (207 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3051 genes)  IEA  
Protein XP_006477618.2 [sequence] [blastp]
XP_024954148.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_006477618.2)
nucl 4,  chlo 2,  plas 2,  cysk_nucl 2  (predict for XP_024954148.2)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_006477618.2)
mito 5,  chlo 3  (predict for XP_024954148.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102611082
ath-u.5
for
AT5G07810
bra-r.6
for
103855745
ghi-r.1
for
107949799
ghi-r.1
for
107887837
bna-r.1
for
106385009
bna-r.1
for
106384999
gma-u.5
for
100788690
vvi-u.5
for
100267344
ppo-u.5
for
7487130
mtr-u.5
for
120579634
sly-u.5
for
101263803
sot-r.1
for
102603029
nta-r.1
for
107811423
nta-r.1
for
107787482
osa-u.5
for
4343803
zma-u.5
for
100277497
tae-r.2
for
123044330
tae-r.2
for
123188058
tae-r.2
for
123052193
hvu-r.1
for
123425439
bdi-r.1
for
100832506


Ortholog ID: 11398
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu bdi
Symbol LOC102611082 AT5G07810 LOC103855745 LOC107949799 LOC107887837 LOC106385009 LOC106384999 LOC100788690 LOC100267344 LOC7487130 LOC120579634 LOC101263803 LOC102603029 LOC107811423 LOC107787482 LOC4343803 LOC100277497 LOC123044330 LOC123188058 LOC123052193 LOC123425439 LOC100832506
Function* uncharacterized LOC102611082 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC100267344 uncharacterized LOC7487130 DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC101263803 DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC107811423 uncharacterized LOC107787482 uncharacterized LOC4343803 uncharacterized LOC100277497 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03440 Homologous recombination 3
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta04814 Motor proteins 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03410 Base excision repair 2
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102611082 830674 103855745 107949799 107887837 106385009 106384999 100788690 100267344 7487130 120579634 101263803 102603029 107811423 107787482 4343803 100277497 123044330 123188058 123052193 123425439 100832506
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