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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g027000v5   ribosomal protein L11 
 ath-u.5   RPL16A   ribosomal protein large subunit 16A 
 ath-u.5   AT3G58700   Ribosomal L5P family protein 
 ath-u.5   RPL16B   ribosomal protein L16B 
 gma-u.5   100818410   60S ribosomal protein L11 
 gma-u.5   100819731   60S ribosomal protein L11 
 gma-u.5   100305912   uncharacterized LOC100305912 
 sly-u.5   101246764   large ribosomal subunit protein uL5z 
 sly-u.5   101259713   large ribosomal subunit protein uL5z 
 sly-u.5   101268775   large ribosomal subunit protein uL5z 
 osa-u.5   4328826   large ribosomal subunit protein uL5 
 osa-u.5   4338077   60S ribosomal protein L11-like 
 osa-u.5   4341262   large ribosomal subunit protein uL5 
 zma-u.5   100283310   60S ribosomal protein L11-1 
 zma-u.5   100282010   60S ribosomal protein L11-1 
 zma-u.5   100193878   60S ribosomal protein L11-1 
 bra-r.6   103861011   60S ribosomal protein L11-2 
 bra-r.6   103856798   60S ribosomal protein L11-2 
 bra-r.6   103853664   60S ribosomal protein L11-1 
 vvi-u.5   100251464   large ribosomal subunit protein uL5z 
 vvi-u.5   100243655   large ribosomal subunit protein uL5 
 ppo-u.5   7455899   60S ribosomal protein L11 
 ppo-u.5   7485258   60S ribosomal protein L11 
 ppo-u.5   7485259   60S ribosomal protein L11 
 mtr-u.5   11426149   60S ribosomal protein L11 
 mtr-u.5   11422951   60S ribosomal protein L11 
 mtr-u.5   11445039   60S ribosomal protein L11 
 tae-r.2   542919   ribosomal protein L11 
 tae-r.2   606335   60S ribosomal protein L11 
 tae-r.2   123115714   60S ribosomal protein L11 
 hvu-r.1   123427513   60S ribosomal protein L11-like 
 hvu-r.1   123443087   60S ribosomal protein L11 
 ghi-r.1   121218686   60S ribosomal protein L11 
 ghi-r.1   107909651   60S ribosomal protein L11 
 ghi-r.1   107905822   60S ribosomal protein L11 
 bna-r.1   106381681   60S ribosomal protein L11-1 
 bna-r.1   125590042   60S ribosomal protein L11-2 
 bna-r.1   106406958   60S ribosomal protein L11-1 
 sbi-r.1   110435040   60S ribosomal protein L11-like 
 sbi-r.1   8065931   60S ribosomal protein L11 
 sot-r.1   102598285   60S ribosomal protein L11-1 
 sot-r.1   102584908   60S ribosomal protein L11-2-like 
 sot-r.1   102606209   60S ribosomal protein L11-1 
 cit-r.1   102620439   60S ribosomal protein L11-like 
 cit-r.1   102625025   60S ribosomal protein L11 
 cit-r.1   102630091   60S ribosomal protein L11 
 bdi-r.1   100822639   60S ribosomal protein L11 
 bdi-r.1   100843642   60S ribosomal protein L11 
 bdi-r.1   100829607   60S ribosomal protein L11 
 nta-r.1   107822394   large ribosomal subunit protein uL5z 
 nta-r.1   107763118   large ribosomal subunit protein uL5z 
 nta-r.1   107764084   large ribosomal subunit protein uL5z 

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Top 50 coexpressed genes to CHLRE_01g027000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g027000v5 (cre-r.1 coexpression data)

CoexMap"5715302"


creCHLRE_01g027000v5 | Entrez gene ID : 5715302      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 3 3 3 3 3 2 3 3 3 2 3 3 2 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (43 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001690013.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  plas 3  (predict for XP_001690013.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_001690013.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g027000v5
ath-u.5
for
RPL16A
ath-u.5
for
AT3G58700
ath-u.5
for
RPL16B
gma-u.5
for
100818410
gma-u.5
for
100819731
gma-u.5
for
100305912
sly-u.5
for
101246764
sly-u.5
for
101259713
sly-u.5
for
101268775
osa-u.5
for
4328826
osa-u.5
for
4338077
osa-u.5
for
4341262
zma-u.5
for
100283310
zma-u.5
for
100282010
zma-u.5
for
100193878
bra-r.6
for
103861011
bra-r.6
for
103856798
bra-r.6
for
103853664
vvi-u.5
for
100251464
vvi-u.5
for
100243655
ppo-u.5
for
7455899
ppo-u.5
for
7485258
ppo-u.5
for
7485259
mtr-u.5
for
11426149
mtr-u.5
for
11422951
mtr-u.5
for
11445039
tae-r.2
for
542919
tae-r.2
for
606335
tae-r.2
for
123115714
hvu-r.1
for
123427513
hvu-r.1
for
123443087
ghi-r.1
for
121218686
ghi-r.1
for
107909651
ghi-r.1
for
107905822
bna-r.1
for
106381681
bna-r.1
for
125590042
bna-r.1
for
106406958
sbi-r.1
for
110435040
sbi-r.1
for
8065931
sot-r.1
for
102598285
sot-r.1
for
102584908
sot-r.1
for
102606209
cit-r.1
for
102620439
cit-r.1
for
102625025
cit-r.1
for
102630091
bdi-r.1
for
100822639
bdi-r.1
for
100843642
bdi-r.1
for
100829607
nta-r.1
for
107822394
nta-r.1
for
107763118
nta-r.1
for
107764084


Ortholog ID: 918
Species cre ath ath ath gma gma gma sly sly sly osa osa osa zma zma zma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_01g027000v5 RPL16A AT3G58700 AT5G45775 LOC100819731 LOC100810082 LOC100812386 LOC101246764 LOC101268775 LOC101262882 LOC4328826 LOC4338077 LOC4341262 LOC100282010 LOC100193878 LOC100193696 LOC103861011 LOC103853664 LOC103827776 LOC100251464 LOC100243655 LOC7455899 LOC7485258 LOC7485259 LOC11426149 LOC11422951 LOC11445039 LOC606335 LOC123115714 LOC123060615 LOC123427513 LOC123443087 LOC107909651 LOC107905822 LOC107901696 LOC125590042 LOC106415366 LOC106415365 LOC8084319 LOC8085572 LOC102598285 LOC102584908 LOC102606209 LOC102620439 LOC102625025 LOC102630091 LOC100822639 LOC100843642 LOC100829607 LOC107785771 LOC107798565 LOC107816202
Function* ribosomal protein L11 ribosomal protein large subunit 16A Ribosomal L5P family protein Ribosomal L5P family protein 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z large ribosomal subunit protein uL5 60S ribosomal protein L11-like large ribosomal subunit protein uL5 60S ribosomal protein L11-1 60S ribosomal protein L11-1 60S ribosomal protein L11-like 60S ribosomal protein L11-2 60S ribosomal protein L11-1 60S ribosomal protein L11-2 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-like 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-2 60S ribosomal protein L11-1 60S ribosomal protein L11-1 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-1 60S ribosomal protein L11-2-like 60S ribosomal protein L11-1 60S ribosomal protein L11-like 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z-like large ribosomal subunit protein uL5z
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715302 818874 825039 834617 100819731 100810082 100812386 101246764 101268775 101262882 4328826 4338077 4341262 100282010 100193878 100193696 103861011 103853664 103827776 100251464 100243655 7455899 7485258 7485259 11426149 11422951 11445039 606335 123115714 123060615 123427513 123443087 107909651 107905822 107901696 125590042 106415366 106415365 8084319 8085572 102598285 102584908 102606209 102620439 102625025 102630091 100822639 100843642 100829607 107785771 107798565 107816202
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