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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909651   60S ribosomal protein L11 
 ath-u.5   RPL16A   ribosomal protein large subunit 16A 
 ath-u.5   AT3G58700   Ribosomal L5P family protein 
 ath-u.5   RPL16B   ribosomal protein L16B 
 gma-u.5   100818410   60S ribosomal protein L11 
 gma-u.5   100812386   60S ribosomal protein L11 
 gma-u.5   100791687   60S ribosomal protein L11 
 vvi-u.5   100251464   large ribosomal subunit protein uL5z 
 vvi-u.5   100243655   large ribosomal subunit protein uL5 
 ppo-u.5   7485259   60S ribosomal protein L11 
 ppo-u.5   7485258   60S ribosomal protein L11 
 ppo-u.5   7455899   60S ribosomal protein L11 
 mtr-u.5   11426149   60S ribosomal protein L11 
 mtr-u.5   11445039   60S ribosomal protein L11 
 mtr-u.5   11422951   60S ribosomal protein L11 
 sly-u.5   101262882   large ribosomal subunit protein uL5z 
 sly-u.5   101268775   large ribosomal subunit protein uL5z 
 sly-u.5   101246764   large ribosomal subunit protein uL5z 
 osa-u.5   4341262   large ribosomal subunit protein uL5 
 osa-u.5   4338077   60S ribosomal protein L11-like 
 osa-u.5   4328826   large ribosomal subunit protein uL5 
 zma-u.5   100283310   60S ribosomal protein L11-1 
 zma-u.5   100282010   60S ribosomal protein L11-1 
 zma-u.5   100193696   60S ribosomal protein L11-like 

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Top 50 coexpressed genes to 107909651 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909651 (ghi-r.1 coexpression data)

CoexMap"107909651"


ghiLOC107909651 | Entrez gene ID : 107909651    
Species ghi ath gma vvi ppo mtr sly osa zma cre cit hvu bdi sot bra sbi tae nta bna
Paralog 1 3 3 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein NP_001390027.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  plas 3,  cyto_nucl 3  (predict for NP_001390027.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001390027.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909651

.
ath-u.5
for
RPL16A

.
ath-u.5
for
AT3G58700

.
ath-u.5
for
RPL16B

.
gma-u.5
for
100818410

.
gma-u.5
for
100812386

.
gma-u.5
for
100791687

.
vvi-u.5
for
100251464

.
vvi-u.5
for
100243655

.
ppo-u.5
for
7485259

.
ppo-u.5
for
7485258

.
ppo-u.5
for
7455899

.
mtr-u.5
for
11426149

.
mtr-u.5
for
11445039

.
mtr-u.5
for
11422951

.
sly-u.5
for
101262882

.
sly-u.5
for
101268775

.
sly-u.5
for
101246764

.
osa-u.5
for
4341262

.
osa-u.5
for
4338077

.
osa-u.5
for
4328826

.
zma-u.5
for
100283310

.
zma-u.5
for
100282010

.
zma-u.5
for
100193696

.


Ortholog ID: 918
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G45775 RPL16A LOC100819731 LOC100810082 LOC101262882 LOC101268775 LOC4341262 LOC4328826 LOC100193878 LOC100282010 LOC103861011 LOC103827776 LOC100251464 LOC100243655 LOC7485258 LOC7485259 LOC11445039 LOC11426149 LOC606335 LOC123060615 LOC123443087 LOC123427513 LOC107901696 LOC107909651 LOC106415365 LOC106415366 CHLRE_01g027000v5 LOC8085572 LOC102584908 LOC102606209 LOC102625025 LOC102620439 LOC100822639 LOC100843642 LOC107816202 LOC107798565
Function* Ribosomal L5P family protein ribosomal protein large subunit 16A 60S ribosomal protein L11 60S ribosomal protein L11 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z large ribosomal subunit protein uL5 large ribosomal subunit protein uL5 60S ribosomal protein L11-1 60S ribosomal protein L11-1 60S ribosomal protein L11-2 60S ribosomal protein L11-2 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-like 60S ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-1 60S ribosomal protein L11-1 ribosomal protein L11 60S ribosomal protein L11 60S ribosomal protein L11-2-like 60S ribosomal protein L11-1 60S ribosomal protein L11 60S ribosomal protein L11-like 60S ribosomal protein L11 60S ribosomal protein L11 large ribosomal subunit protein uL5z large ribosomal subunit protein uL5z-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834617 818874 100819731 100810082 101262882 101268775 4341262 4328826 100193878 100282010 103861011 103827776 100251464 100243655 7485258 7485259 11445039 11426149 606335 123060615 123443087 123427513 107901696 107909651 106415365 106415366 5715302 8085572 102584908 102606209 102625025 102620439 100822639 100843642 107816202 107798565
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