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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g488850v5   uncharacterized protein 
 ath-u.5   alpha-ADR   alpha-adaptin 
 ath-u.5   AT5G22780   Adaptor protein complex AP-2, alpha subunit 
 gma-u.5   100798273   AP-2 complex subunit alpha-1 
 gma-u.5   100793930   AP-2 complex subunit alpha-1 
 sly-u.5   101246147   AP-2 complex subunit alpha-1-like 
 sly-u.5   101245025   AP-2 complex subunit alpha-1-like 
 osa-u.5   4331370   AP-2 complex subunit alpha-2 
 zma-u.5   100280063   uncharacterized LOC100280063 
 zma-u.5   100384187   AP-2 complex subunit alpha-2 
 bra-r.6   103873020   AP-2 complex subunit alpha-2 
 bra-r.6   103845528   AP-2 complex subunit alpha-1 
 vvi-u.5   100241344   AP-2 complex subunit alpha-1 
 ppo-u.5   18098001   AP-2 complex subunit alpha-1 
 ppo-u.5   7474927   AP-2 complex subunit alpha-1 
 mtr-u.5   25487490   AP-2 complex subunit alpha-1 
 tae-r.2   123094065   AP-2 complex subunit alpha-1 
 tae-r.2   123106202   AP-2 complex subunit alpha-1 
 hvu-r.1   123450031   AP-2 complex subunit alpha-1-like 
 ghi-r.1   107932510   AP-2 complex subunit alpha-1 
 ghi-r.1   107931934   AP-2 complex subunit alpha-1 
 ghi-r.1   107891639   AP-2 complex subunit alpha-1 
 bna-r.1   106371638   AP-2 complex subunit alpha-1 
 bna-r.1   106427863   AP-2 complex subunit alpha-2 
 bna-r.1   106376428   AP-2 complex subunit alpha-2 
 sbi-r.1   8078010   AP-2 complex subunit alpha-2 
 sot-r.1   102588472   AP-2 complex subunit alpha-1-like 
 sot-r.1   102597845   AP-2 complex subunit alpha-1-like 
 cit-r.1   102613876   AP-2 complex subunit alpha-1-like 
 bdi-r.1   100829540   AP-2 complex subunit alpha-2 
 nta-r.1   107826292   AP-2 complex subunit alpha-1 
 nta-r.1   107792655   AP-2 complex subunit alpha-1 
 nta-r.1   107775474   AP-2 complex subunit alpha-1 

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Top 50 coexpressed genes to CHLRE_12g488850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g488850v5 (cre-r.1 coexpression data)

CoexMap"5716671"


creCHLRE_12g488850v5 | Entrez gene ID : 5716671    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 2 1 2 2 1 2 1 2 1 3 3 1 2 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04144 [list] [network] Endocytosis (52 genes)
GO BP
GO:0072583 [list] [network] clathrin-dependent endocytosis  (7 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (159 genes)  IEA  
GO CC
GO:0030122 [list] [network] AP-2 adaptor complex  (2 genes)  IEA  
GO:0030117 [list] [network] membrane coat  (31 genes)  IEA  
GO MF
GO:0035615 [list] [network] clathrin adaptor activity  (4 genes)  IEA  
Protein XP_042918051.1 [sequence] [blastp]
XP_042918052.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1  (predict for XP_042918051.1)
cyto 8,  chlo 1  (predict for XP_042918052.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042918051.1)
other 6  (predict for XP_042918052.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g488850v5
ath-u.5
for
alpha-ADR
ath-u.5
for
AT5G22780
gma-u.5
for
100798273
gma-u.5
for
100793930
sly-u.5
for
101246147
sly-u.5
for
101245025
osa-u.5
for
4331370
zma-u.5
for
100280063
zma-u.5
for
100384187
bra-r.6
for
103873020
bra-r.6
for
103845528
vvi-u.5
for
100241344
ppo-u.5
for
18098001
ppo-u.5
for
7474927
mtr-u.5
for
25487490
tae-r.2
for
123094065
tae-r.2
for
123106202
hvu-r.1
for
123450031
ghi-r.1
for
107932510
ghi-r.1
for
107931934
ghi-r.1
for
107891639
bna-r.1
for
106371638
bna-r.1
for
106427863
bna-r.1
for
106376428
sbi-r.1
for
8078010
sot-r.1
for
102588472
sot-r.1
for
102597845
cit-r.1
for
102613876
bdi-r.1
for
100829540
nta-r.1
for
107826292
nta-r.1
for
107792655
nta-r.1
for
107775474


Ortholog ID: 5838
Species cre ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi ghi bna bna bna sbi sot sot cit bdi nta nta nta
Symbol CHLRE_12g488850v5 alpha-ADR AT5G22780 LOC100798273 LOC100793930 LOC101246147 LOC101245025 LOC4331370 LOC100280063 LOC100384187 LOC103873020 LOC103845528 LOC100241344 LOC18098001 LOC7474927 LOC25487490 LOC123094065 LOC123106202 LOC123450031 LOC107932510 LOC107931934 LOC107889041 LOC106371638 LOC106427863 LOC106376428 LOC8078010 LOC102588472 LOC102597845 LOC102613876 LOC100829540 LOC107826292 LOC107792655 LOC107768030
Function* uncharacterized protein alpha-adaptin Adaptor protein complex AP-2, alpha subunit AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1-like AP-2 complex subunit alpha-1-like AP-2 complex subunit alpha-2 uncharacterized LOC100280063 AP-2 complex subunit alpha-2 AP-2 complex subunit alpha-2 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1-like AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-2 AP-2 complex subunit alpha-2 AP-2 complex subunit alpha-2 AP-2 complex subunit alpha-1-like AP-2 complex subunit alpha-1-like AP-2 complex subunit alpha-1-like AP-2 complex subunit alpha-2 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 4
cre04142 Lysosome 4
cre04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 6
ath05100 Bacterial invasion of epithelial cells 4
ath04142 Lysosome 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 6
ath05100 Bacterial invasion of epithelial cells 3
ath04142 Lysosome 2
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 7
gma05100 Bacterial invasion of epithelial cells 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 5
sly01200 Carbon metabolism 5
sly00640 Propanoate metabolism 3
sly01210 2-Oxocarboxylic acid metabolism 3
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 5
sly05100 Bacterial invasion of epithelial cells 4
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04141 Protein processing in endoplasmic reticulum 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04142 Lysosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04144 Endocytosis 4
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 2
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 8
bra04142 Lysosome 5
bra05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04142 Lysosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 5
ppo04144 Endocytosis 5
ppo05100 Bacterial invasion of epithelial cells 3
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo04142 Lysosome 5
ppo05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04142 Lysosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 9
tae04142 Lysosome 8
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 6
tae04144 Endocytosis 5
tae05100 Bacterial invasion of epithelial cells 3
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04142 Lysosome 2
hvu05100 Bacterial invasion of epithelial cells 2
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi03013 Nucleocytoplasmic transport 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi03013 Nucleocytoplasmic transport 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 6
sot04142 Lysosome 4
sot05100 Bacterial invasion of epithelial cells 4
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 6
sot04144 Endocytosis 6
sot04141 Protein processing in endoplasmic reticulum 4
sot05100 Bacterial invasion of epithelial cells 3
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 6
bdi05100 Bacterial invasion of epithelial cells 3
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716671 832340 832341 100798273 100793930 101246147 101245025 4331370 100280063 100384187 103873020 103845528 100241344 18098001 7474927 25487490 123094065 123106202 123450031 107932510 107931934 107889041 106371638 106427863 106376428 8078010 102588472 102597845 102613876 100829540 107826292 107792655 107768030
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