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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g340200v5   uncharacterized protein 
 ath-u.5   PGRL1B   PGR5-like B 
 ath-u.5   PGR5-LIKE A   PGR5-LIKE A 
 gma-u.5   100810598   PGR5-like protein 1A, chloroplastic 
 gma-u.5   100785186   PGR5-like protein 1A, chloroplastic 
 gma-u.5   100784314   PGR5-like protein 1B, chloroplastic 
 sly-u.5   101251312   PGR5-like protein 1A, chloroplastic 
 sly-u.5   101247736   PGR5-like protein 1B, chloroplastic 
 osa-u.5   4346096   PGR5-like protein 1A, chloroplastic 
 osa-u.5   4334845   PGR5-like protein 1A, chloroplastic 
 zma-u.5   103632242   PGR5-like protein 1B, chloroplastic 
 zma-u.5   100273908   PGR5-like protein 1B chloroplastic 
 bra-r.6   103861343   PGR5-like protein 1A, chloroplastic 
 bra-r.6   103858614   PGR5-like protein 1B, chloroplastic 
 bra-r.6   103860435   PGR5-like protein 1A, chloroplastic 
 vvi-u.5   100242824   PGR5-like protein 1B, chloroplastic 
 ppo-u.5   7479243   PGR5-like protein 1A, chloroplastic 
 ppo-u.5   7490927   PGR5-like protein 1A, chloroplastic 
 mtr-u.5   25493634   PGR5-like protein 1B, chloroplastic 
 mtr-u.5   11436266   PGR5-like protein 1A, chloroplastic 
 tae-r.2   123087488   PGR5-like protein 1A, chloroplastic 
 tae-r.2   123114448   PGR5-like protein 1B, chloroplastic 
 tae-r.2   123123931   PGR5-like protein 1A, chloroplastic 
 hvu-r.1   123395217   PGR5-like protein 1A, chloroplastic 
 ghi-r.1   107926919   PGR5-like protein 1B, chloroplastic 
 ghi-r.1   107930000   PGR5-like protein 1B, chloroplastic 
 ghi-r.1   107946983   PGR5-like protein 1A, chloroplastic 
 bna-r.1   111214284   PGR5-like protein 1A, chloroplastic 
 bna-r.1   106440784   PGR5-like protein 1A, chloroplastic 
 bna-r.1   106440472   PGR5-like protein 1A, chloroplastic 
 sbi-r.1   110436541   PGR5-like protein 1B, chloroplastic 
 sbi-r.1   110432778   PGR5-like protein 1A, chloroplastic 
 sot-r.1   102598666   PGR5-like protein 1B, chloroplastic 
 sot-r.1   102584115   PGR5-like protein 1B, chloroplastic 
 cit-r.1   102622060   PGR5-like protein 1A, chloroplastic 
 bdi-r.1   100844822   PGR5-like protein 1A, chloroplastic 
 bdi-r.1   100829324   PGR5-like protein 1A, chloroplastic 
 nta-r.1   107805035   PGR5-like protein 1B, chloroplastic 
 nta-r.1   107796408   PGR5-like protein 1B, chloroplastic 
 nta-r.1   107778116   PGR5-like protein 1A, chloroplastic 

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Top 50 coexpressed genes to CHLRE_07g340200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g340200v5 (cre-r.1 coexpression data)

CoexMap"5718097"


creCHLRE_07g340200v5 | Entrez gene ID : 5718097      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 2 2 2 3 1 2 2 3 1 3 3 2 2 1 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (3 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
GO:0016730 [list] [network] oxidoreductase activity, acting on iron-sulfur proteins as donors  (2 genes)  IEA  
Protein XP_001692513.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  E.R. 1  (predict for XP_001692513.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_001692513.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g340200v5
ath-u.5
for
PGRL1B
ath-u.5
for
PGR5-LIKE A
gma-u.5
for
100810598
gma-u.5
for
100785186
gma-u.5
for
100784314
sly-u.5
for
101251312
sly-u.5
for
101247736
osa-u.5
for
4346096
osa-u.5
for
4334845
zma-u.5
for
103632242
zma-u.5
for
100273908
bra-r.6
for
103861343
bra-r.6
for
103858614
bra-r.6
for
103860435
vvi-u.5
for
100242824
ppo-u.5
for
7479243
ppo-u.5
for
7490927
mtr-u.5
for
25493634
mtr-u.5
for
11436266
tae-r.2
for
123087488
tae-r.2
for
123114448
tae-r.2
for
123123931
hvu-r.1
for
123395217
ghi-r.1
for
107926919
ghi-r.1
for
107930000
ghi-r.1
for
107946983
bna-r.1
for
111214284
bna-r.1
for
106440784
bna-r.1
for
106440472
sbi-r.1
for
110436541
sbi-r.1
for
110432778
sot-r.1
for
102598666
sot-r.1
for
102584115
cit-r.1
for
102622060
bdi-r.1
for
100844822
bdi-r.1
for
100829324
nta-r.1
for
107805035
nta-r.1
for
107796408
nta-r.1
for
107778116


Ortholog ID: 4101
Species cre ath ath gma gma gma sly sly osa osa zma zma bra bra bra vvi ppo ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sbi sot sot cit bdi bdi nta nta nta
Symbol CHLRE_07g340200v5 PGRL1B PGR5-LIKE A LOC100810598 LOC100785186 LOC100784314 LOC101251312 LOC101247736 LOC4346096 LOC4334845 LOC103632242 LOC100273908 LOC103861343 LOC103858614 LOC103860435 LOC100242824 LOC7479243 LOC7490927 LOC25493634 LOC11436266 LOC123087488 LOC123114448 LOC123123931 LOC123395217 LOC107926919 LOC107930000 LOC107946983 LOC106440784 LOC106440472 LOC106375746 LOC110436541 LOC110432778 LOC102598666 LOC102584115 LOC102622060 LOC100844822 LOC100829324 LOC107805035 LOC107778116 LOC107819369
Function* uncharacterized protein PGR5-like B PGR5-LIKE A PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 5
ath00260 Glycine, serine and threonine metabolism 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 9
gma01200 Carbon metabolism 9
gma00195 Photosynthesis 4
gma00030 Pentose phosphate pathway 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 5
gma01200 Carbon metabolism 5
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 9
gma01200 Carbon metabolism 9
gma00030 Pentose phosphate pathway 3
gma00195 Photosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00195 Photosynthesis 6
sly00260 Glycine, serine and threonine metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01200 Carbon metabolism 4
osa00710 Carbon fixation by Calvin cycle 3
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00195 Photosynthesis 4
zma00196 Photosynthesis - antenna proteins 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 5
zma01230 Biosynthesis of amino acids 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 5
bra00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 5
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 7
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00195 Photosynthesis 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00670 One carbon pool by folate 3
ghi00785 Lipoic acid metabolism 3
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
bna00620 Pyruvate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 5
sbi00196 Photosynthesis - antenna proteins 5
sbi00710 Carbon fixation by Calvin cycle 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 9
sot00630 Glyoxylate and dicarboxylate metabolism 7
sot00710 Carbon fixation by Calvin cycle 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00195 Photosynthesis 3
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00710 Carbon fixation by Calvin cycle 3
bdi01230 Biosynthesis of amino acids 3
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00030 Pentose phosphate pathway 4
nta00051 Fructose and mannose metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718097 826803 828388 100810598 100785186 100784314 101251312 101247736 4346096 4334845 103632242 100273908 103861343 103858614 103860435 100242824 7479243 7490927 25493634 11436266 123087488 123114448 123123931 123395217 107926919 107930000 107946983 106440784 106440472 106375746 110436541 110432778 102598666 102584115 102622060 100844822 100829324 107805035 107778116 107819369
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