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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g564950v5   uncharacterized protein 
 ath-u.5   AT3G22980   Ribosomal protein S5/Elongation factor G/III/V family protein 
 gma-u.5   100775257   elongation factor-like GTPase 1 
 sly-u.5   101258526   uncharacterized LOC101258526 
 osa-u.5   4333588   uncharacterized LOC4333588 
 zma-u.5   103643809   elongation factor-like GTPase 1 
 bra-r.6   103868951   elongation factor-like GTPase 1 
 ppo-u.5   7460122   ribosome assembly protein 1 
 mtr-u.5   11417702   elongation factor-like GTPase 1 
 tae-r.2   123113170   elongation factor-like GTPase 1 
 tae-r.2   123104882   elongation factor-like GTPase 1 
 hvu-r.1   123452079   elongation factor-like GTPase 1 
 ghi-r.1   107947068   elongation factor-like GTPase 1 
 ghi-r.1   121211152   elongation factor-like GTPase 1 
 bna-r.1   106451782   elongation factor-like GTPase 1 
 bna-r.1   106401392   elongation factor-like GTPase 1 
 sbi-r.1   8057224   uncharacterized LOC8057224 
 sot-r.1   102604340   elongation factor Tu GTP-binding domain-containing protein 1 
 cit-r.1   102622289   uncharacterized LOC102622289 
 bdi-r.1   100822687   elongation factor-like GTPase 1 
 nta-r.1   107823909   uncharacterized LOC107823909 

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Top 50 coexpressed genes to CHLRE_13g564950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g564950v5 (cre-r.1 coexpression data)

CoexMap"5719031"


creCHLRE_13g564950v5 | Entrez gene ID : 5719031    
Species cre ath gma sly osa zma bra ppo mtr tae hvu ghi bna sbi sot cit bdi nta vvi
Paralog 1 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042256 [list] [network] cytosolic ribosome assembly  (4 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (370 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO MF
GO:0043022 [list] [network] ribosome binding  (39 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
Protein XP_042917221.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 3,  cyto 1,  chlo_mito 1  (predict for XP_042917221.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_042917221.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g564950v5
ath-u.5
for
AT3G22980
gma-u.5
for
100775257
sly-u.5
for
101258526
osa-u.5
for
4333588
zma-u.5
for
103643809
bra-r.6
for
103868951
ppo-u.5
for
7460122
mtr-u.5
for
11417702
tae-r.2
for
123113170
tae-r.2
for
123104882
hvu-r.1
for
123452079
ghi-r.1
for
107947068
ghi-r.1
for
121211152
bna-r.1
for
106451782
bna-r.1
for
106401392
sbi-r.1
for
8057224
sot-r.1
for
102604340
cit-r.1
for
102622289
bdi-r.1
for
100822687
nta-r.1
for
107823909


Ortholog ID: 8478
Species cre ath gma sly osa zma bra ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol CHLRE_13g564950v5 AT3G22980 LOC100775257 LOC101258526 LOC4333588 LOC103643809 LOC103868951 LOC7460122 LOC11417702 LOC123104882 LOC123122691 LOC123452079 LOC107947068 LOC121211152 LOC106451782 LOC106401392 LOC8057224 LOC102604340 LOC102622289 LOC100822687 LOC107823909
Function* uncharacterized protein Ribosomal protein S5/Elongation factor G/III/V family protein elongation factor-like GTPase 1 uncharacterized LOC101258526 uncharacterized LOC4333588 elongation factor-like GTPase 1 elongation factor-like GTPase 1 ribosome assembly protein 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 uncharacterized LOC8057224 elongation factor Tu GTP-binding domain-containing protein 1 uncharacterized LOC102622289 elongation factor-like GTPase 1 uncharacterized LOC107823909
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma00270 Cysteine and methionine metabolism 3
gma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03013 Nucleocytoplasmic transport 4
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03013 Nucleocytoplasmic transport 4
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719031 821872 100775257 101258526 4333588 103643809 103868951 7460122 11417702 123104882 123122691 123452079 107947068 121211152 106451782 106401392 8057224 102604340 102622289 100822687 107823909
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