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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g564950v5   uncharacterized protein 
 ath-u.5   AT3G22980   Ribosomal protein S5/Elongation factor G/III/V family protein 
 gma-u.5   100775257   elongation factor-like GTPase 1 
 sly-u.5   101258526   uncharacterized LOC101258526 
 osa-u.5   4333588   uncharacterized LOC4333588 
 zma-u.5   103643809   elongation factor-like GTPase 1 
 ppo-u.5   7460122   ribosome assembly protein 1 
 mtr-u.5   11417702   elongation factor-like GTPase 1 

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Top 50 coexpressed genes to CHLRE_13g564950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g564950v5 (cre-r.1 coexpression data)

CoexMap"5719031"


creCHLRE_13g564950v5 | Entrez gene ID : 5719031    
Species cre ath gma sly osa zma ppo mtr sbi nta bra vvi cit hvu bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042256 [list] [network] cytosolic ribosome assembly  (4 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (370 genes)  IEA  
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO MF
GO:0043022 [list] [network] ribosome binding  (39 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
Protein XP_042917221.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 3,  cyto 1,  chlo_mito 1  (predict for XP_042917221.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_042917221.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g564950v5

.
ath-u.5
for
AT3G22980

.
gma-u.5
for
100775257

.
sly-u.5
for
101258526

.
osa-u.5
for
4333588

.
zma-u.5
for
103643809

.
ppo-u.5
for
7460122

.
mtr-u.5
for
11417702

.


Ortholog ID: 8478
Species ath gma sly osa zma bra ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT3G22980 LOC100775257 LOC101258526 LOC4333588 LOC103643809 LOC103868951 LOC7460122 LOC11417702 LOC123122691 LOC123104882 LOC123452079 LOC121211152 LOC107947068 LOC106451782 LOC106401392 CHLRE_13g564950v5 LOC8057224 LOC102604340 LOC102622289 LOC100822687 LOC107823909
Function* Ribosomal protein S5/Elongation factor G/III/V family protein elongation factor-like GTPase 1 uncharacterized LOC101258526 uncharacterized LOC4333588 elongation factor-like GTPase 1 elongation factor-like GTPase 1 ribosome assembly protein 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 elongation factor-like GTPase 1 uncharacterized protein uncharacterized LOC8057224 elongation factor Tu GTP-binding domain-containing protein 1 uncharacterized LOC102622289 elongation factor-like GTPase 1 uncharacterized LOC107823909
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma00270 Cysteine and methionine metabolism 3
gma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03013 Nucleocytoplasmic transport 4
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03013 Nucleocytoplasmic transport 4
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821872 100775257 101258526 4333588 103643809 103868951 7460122 11417702 123122691 123104882 123452079 121211152 107947068 106451782 106401392 5719031 8057224 102604340 102622289 100822687 107823909
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