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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g568700v5   uncharacterized protein 
 ath-u.5   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 gma-u.5   100500422   uncharacterized LOC100500422 
 gma-u.5   100796934   G patch domain-containing protein TGH 
 sly-u.5   101243875   G patch domain-containing protein TGH 
 osa-u.5   4341077   G patch domain-containing protein TGH homolog 
 zma-u.5   103638373   G patch domain-containing protein TGH homolog 
 bra-r.6   103860531   G patch domain-containing protein TGH 
 bra-r.6   103837348   G patch domain-containing protein TGH 
 vvi-u.5   100242404   G patch domain-containing protein TGH 
 ppo-u.5   7490080   G patch domain-containing protein TGH 
 mtr-u.5   11441585   G patch domain-containing protein TGH 
 tae-r.2   123150748   G patch domain-containing protein TGH homolog 
 tae-r.2   123164435   G patch domain-containing protein TGH homolog 
 tae-r.2   123156409   G patch domain-containing protein TGH homolog 
 hvu-r.1   123412942   G patch domain-containing protein TGH homolog 
 ghi-r.1   107949739   G patch domain-containing protein TGH 
 ghi-r.1   107887061   G patch domain-containing protein TGH 
 bna-r.1   106439903   G patch domain-containing protein TGH 
 bna-r.1   106374036   G patch domain-containing protein TGH 
 bna-r.1   106366057   G patch domain-containing protein TGH-like 
 sbi-r.1   8078300   G patch domain-containing protein TGH homolog 
 sot-r.1   102599029   G patch domain-containing protein TGH 
 cit-r.1   102624586   G patch domain-containing protein TGH 
 bdi-r.1   100831112   G patch domain-containing protein TGH homolog 
 nta-r.1   107789035   G patch domain-containing protein TGH 
 nta-r.1   107808070   G patch domain-containing protein TGH 

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Top 50 coexpressed genes to CHLRE_13g568700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g568700v5 (cre-r.1 coexpression data)

CoexMap"5719096"


creCHLRE_13g568700v5 | Entrez gene ID : 5719096    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 1 1 3 1 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (143 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042917311.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042917311.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042917311.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g568700v5
ath-u.5
for
TGH
gma-u.5
for
100500422
gma-u.5
for
100796934
sly-u.5
for
101243875
osa-u.5
for
4341077
zma-u.5
for
103638373
bra-r.6
for
103860531
bra-r.6
for
103837348
vvi-u.5
for
100242404
ppo-u.5
for
7490080
mtr-u.5
for
11441585
tae-r.2
for
123150748
tae-r.2
for
123164435
tae-r.2
for
123156409
hvu-r.1
for
123412942
ghi-r.1
for
107949739
ghi-r.1
for
107887061
bna-r.1
for
106439903
bna-r.1
for
106374036
bna-r.1
for
106366057
sbi-r.1
for
8078300
sot-r.1
for
102599029
cit-r.1
for
102624586
bdi-r.1
for
100831112
nta-r.1
for
107789035
nta-r.1
for
107808070


Ortholog ID: 8617
Species cre ath gma gma sly osa zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_13g568700v5 TGH LOC100500422 LOC100796934 LOC101243875 LOC4341077 LOC103638373 LOC103860531 LOC103837348 LOC100242404 LOC7490080 LOC11441585 LOC123150748 LOC123164435 LOC123156409 LOC123412942 LOC107949739 LOC107887061 LOC106374036 LOC106366057 LOC106360523 LOC8078300 LOC102599029 LOC102624586 LOC100831112 LOC107789035 LOC107808070
Function* uncharacterized protein SWAP (Suppressor-of-White-APricot)/surp domain-containing protein uncharacterized LOC100500422 G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH-like G patch domain-containing protein TGH-like G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719096 832372 100500422 100796934 101243875 4341077 103638373 103860531 103837348 100242404 7490080 11441585 123150748 123164435 123156409 123412942 107949739 107887061 106374036 106366057 106360523 8078300 102599029 102624586 100831112 107789035 107808070
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