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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g548250v5   uncharacterized protein 
 ath-u.5   AT5G47790   SMAD/FHA domain-containing protein 
 gma-u.5   100804993   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 gma-u.5   100783216   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 sly-u.5   101254681   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 osa-u.5   4345277   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 zma-u.5   100279282   uncharacterized LOC100279282 
 zma-u.5   103626067   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 bra-r.6   103827618   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 vvi-u.5   100243354   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 ppo-u.5   18106011   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 ppo-u.5   7463636   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 mtr-u.5   11406449   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 tae-r.2   123185691   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 tae-r.2   123179870   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 tae-r.2   123103627   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 hvu-r.1   123428386   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 ghi-r.1   107963738   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 ghi-r.1   107960138   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 bna-r.1   106410348   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 bna-r.1   106402191   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 sbi-r.1   8062987   uncharacterized LOC8062987 
 sot-r.1   102595121   nuclear inhibitor of protein phosphatase 1 
 cit-r.1   102621149   hypothetical protein 
 bdi-r.1   100831964   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 nta-r.1   107814041   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 
 nta-r.1   107822132   protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog 

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Top 50 coexpressed genes to CHLRE_12g548250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g548250v5 (cre-r.1 coexpression data)

CoexMap"5719623"


creCHLRE_12g548250v5 | Entrez gene ID : 5719623    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042919055.1 [sequence] [blastp]
XP_042919056.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cyto 2  (predict for XP_042919055.1)
nucl 5,  chlo 3,  cyto 2  (predict for XP_042919056.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042919055.1)
other 8  (predict for XP_042919056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g548250v5
ath-u.5
for
AT5G47790
gma-u.5
for
100804993
gma-u.5
for
100783216
sly-u.5
for
101254681
osa-u.5
for
4345277
zma-u.5
for
100279282
zma-u.5
for
103626067
bra-r.6
for
103827618
vvi-u.5
for
100243354
ppo-u.5
for
18106011
ppo-u.5
for
7463636
mtr-u.5
for
11406449
tae-r.2
for
123185691
tae-r.2
for
123179870
tae-r.2
for
123103627
hvu-r.1
for
123428386
ghi-r.1
for
107963738
ghi-r.1
for
107960138
bna-r.1
for
106410348
bna-r.1
for
106402191
sbi-r.1
for
8062987
sot-r.1
for
102595121
cit-r.1
for
102621149
bdi-r.1
for
100831964
nta-r.1
for
107814041
nta-r.1
for
107822132


Ortholog ID: 9149
Species cre ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_12g548250v5 AT5G47790 LOC100804993 LOC100783216 LOC101254681 LOC4345277 LOC100279282 LOC103626067 LOC103827618 LOC100243354 LOC18106011 LOC7463636 LOC11406449 LOC123185691 LOC123179870 LOC123103627 LOC123428386 LOC107963738 LOC107960138 LOC106410348 LOC106402191 LOC8062987 LOC102595121 LOC102621149 LOC100831964 LOC107814041 LOC107822132
Function* uncharacterized protein SMAD/FHA domain-containing protein protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog uncharacterized LOC100279282 protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog uncharacterized LOC8062987 nuclear inhibitor of protein phosphatase 1 hypothetical protein protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 3
mtr03420 Nucleotide excision repair 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719623 834830 100804993 100783216 101254681 4345277 100279282 103626067 103827618 100243354 18106011 7463636 11406449 123185691 123179870 123103627 123428386 107963738 107960138 106410348 106402191 8062987 102595121 102621149 100831964 107814041 107822132
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