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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1  CHLRE_09g389900v5  uncharacterized protein 
 ath-u.5  RIK  RS2-interacting KH protein 
 gma-u.5  100798576  protein RIK 
 gma-u.5  100806616  protein RIK 
 sly-u.5  101249326  protein RIK 
 osa-u.5  4332050  protein RIK 
 zma-u.5  732737  ROUGH SHEATH2-interacting KH-domain protein 
 bra-r.6  103854131  protein RIK 
 vvi-u.5  100265165  protein RIK 
 ppo-u.5  7467895  protein RIK 
 mtr-u.5  25497511  protein RIK 
 tae-r.2  123098252  protein RIK 
 tae-r.2  123092979  protein RIK 
 tae-r.2  123085078  protein RIK 
 hvu-r.1  123449321  protein RIK 
 ghi-r.1  107923951  protein RIK 
 bna-r.1  106371099  protein RIK 
 bna-r.1  106382176  protein RIK 
 sbi-r.1  110436523  protein RIK 
 sot-r.1  102580038  protein RIK 
 cit-r.1  102630460  protein RIK 
 bdi-r.1  100835047  protein RIK 
 nta-r.1  107776959  protein RIK 
 nta-r.1  107769386  protein RIK 

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Top 50 coexpressed genes to CHLRE_09g389900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g389900v5 (cre-r.1 coexpression data)

CoexMap"5720062"


creCHLRE_09g389900v5 | Entrez gene ID : 5720062
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 1 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042921016.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042921016.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_042921016.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cre-r.1
for
CHLRE_09g389900v5


ath-u.5
for
RIK


gma-u.5
for
100798576


gma-u.5
for
100806616


sly-u.5
for
101249326


osa-u.5
for
4332050


zma-u.5
for
732737


bra-r.6
for
103854131


vvi-u.5
for
100265165


ppo-u.5
for
7467895


mtr-u.5
for
25497511


tae-r.2
for
123098252


tae-r.2
for
123092979


tae-r.2
for
123085078


hvu-r.1
for
123449321


ghi-r.1
for
107923951


bna-r.1
for
106371099


bna-r.1
for
106382176


sbi-r.1
for
110436523


sot-r.1
for
102580038


cit-r.1
for
102630460


bdi-r.1
for
100835047


nta-r.1
for
107776959


nta-r.1
for
107769386



Ortholog ID: 10802
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_09g389900v5 RIK LOC100798576 LOC100806616 LOC101249326 LOC4332050 LOC732737 LOC103854131 LOC100265165 LOC7467895 LOC25497511 LOC123098252 LOC123092979 LOC123085078 LOC123449321 LOC107923951 LOC106371099 LOC106382176 LOC110436523 LOC102580038 LOC102630460 LOC100835047 LOC107776959 LOC107769386
Function* uncharacterized protein RS2-interacting KH protein protein RIK protein RIK protein RIK protein RIK ROUGH SHEATH2-interacting KH-domain protein protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00730 Thiamine metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5720062 822600 100798576 100806616 101249326 4332050 732737 103854131 100265165 7467895 25497511 123098252 123092979 123085078 123449321 107923951 106371099 106382176 110436523 102580038 102630460 100835047 107776959 107769386
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