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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249326   protein RIK 
 sly-r.6   101249326   protein RIK 
 ath-u.5   RIK   RS2-interacting KH protein 
 gma-u.5   100806616   protein RIK 
 gma-u.5   100798576   protein RIK 
 vvi-u.5   100265165   protein RIK 
 ppo-u.5   7467895   protein RIK 
 mtr-u.5   25497511   protein RIK 
 osa-u.5   4332050   protein RIK 
 zma-u.5   732737   ROUGH SHEATH2-interacting KH-domain protein 

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Top 50 coexpressed genes to 101249326 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249326 (sly-u.5 coexpression data)

CoexMap"101249326"


slyLOC101249326 | Entrez gene ID : 101249326      
Species sly ath gma vvi ppo mtr osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004233384.2 [sequence] [blastp]
XP_010317127.2 [sequence] [blastp]
XP_069149547.1 [sequence] [blastp]
XP_069149548.1 [sequence] [blastp]
XP_069149549.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  vacu 1,  plas 1,  E.R. 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_004233384.2)
nucl 3,  chlo 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  plas 1,  cysk 1,  golg 1,  chlo_mito 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_010317127.2)
chlo 2,  nucl 2,  E.R. 2,  vacu 1,  cysk_nucl 1,  cyto 1,  chlo_mito 1,  nucl_plas 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_069149547.1)
E.R. 3,  nucl 2,  E.R._vacu 2,  chlo 1,  vacu 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_069149548.1)
chlo 2,  nucl 2,  E.R. 2,  vacu 1,  cysk_nucl 1,  cyto 1,  chlo_mito 1,  nucl_plas 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_069149549.1)
Subcellular
localization
TargetP
chlo 7,  other 6  (predict for XP_004233384.2)
chlo 7,  other 6  (predict for XP_010317127.2)
chlo 7,  other 6  (predict for XP_069149547.1)
chlo 7,  other 6  (predict for XP_069149548.1)
chlo 7,  other 6  (predict for XP_069149549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249326

.
sly-r.6
for
101249326

.
ath-u.5
for
RIK

.
gma-u.5
for
100806616

.
gma-u.5
for
100798576

.
vvi-u.5
for
100265165

.
ppo-u.5
for
7467895

.
mtr-u.5
for
25497511

.
osa-u.5
for
4332050

.
zma-u.5
for
732737

.


Ortholog ID: 10802
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol RIK LOC100798576 LOC100806616 LOC101249326 LOC4332050 LOC732737 LOC103854131 LOC100265165 LOC7467895 LOC25497511 LOC123085078 LOC123098252 LOC123449321 LOC107923951 LOC106371099 LOC106382176 CHLRE_09g389900v5 LOC110436523 LOC102580038 LOC102630460 LOC100835047 LOC107769386 LOC107776959
Function* RS2-interacting KH protein protein RIK protein RIK protein RIK protein RIK ROUGH SHEATH2-interacting KH-domain protein protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK uncharacterized protein protein RIK protein RIK protein RIK protein RIK protein RIK protein RIK
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00730 Thiamine metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822600 100798576 100806616 101249326 4332050 732737 103854131 100265165 7467895 25497511 123085078 123098252 123449321 107923951 106371099 106382176 5720062 110436523 102580038 102630460 100835047 107769386 107776959
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