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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g390763v5   uncharacterized protein 
 ath-u.5   RABB1C   RAB GTPase homolog B1C 
 ath-u.5   GB2   GTP-binding 2 
 gma-u.5   100784816   ras-related protein RABB1c 
 gma-u.5   100797461   ras-related protein RABB1b-like 
 gma-u.5   100790031   ras-related protein RABB1b 
 sly-u.5   101253324   ras-related protein RABB1c 
 sly-u.5   101257123   ras-related protein RABB1b 
 osa-u.5   4329809   ras-related protein Rab-2-B 
 osa-u.5   4336117   ras-related protein Rab-2-B 
 zma-u.5   542765   ras-like gene 
 bra-r.6   103868349   ras-related protein RABB1c 
 bra-r.6   103872509   ras-related protein RABB1b 
 vvi-u.5   100263184   ras-related protein RABB1c 
 vvi-u.5   100260965   ras-related protein RABB1b 
 vvi-u.5   100243270   ras-related protein RABB1c 
 ppo-u.5   7478579   ras-related protein RABB1b 
 ppo-u.5   18105986   ras-related protein RABB1c 
 ppo-u.5   7489186   ras-related protein RABB1c 
 mtr-u.5   11416007   ras-related protein RABB1b 
 mtr-u.5   11407181   ras-related protein RABB1c 
 tae-r.2   123127566   ras-related protein Rab-2-B 
 hvu-r.1   123405971   ras-related protein Rab-2-B 
 ghi-r.1   107954732   ras-related protein RABB1c 
 ghi-r.1   107892138   ras-related protein RABB1b 
 ghi-r.1   107892242   ras-related protein RABB1b 
 bna-r.1   111211993   ras-related protein RABB1c 
 bna-r.1   111207447   ras-related protein RABB1b-like 
 bna-r.1   106352248   ras-related protein RABB1b 
 sbi-r.1   8058685   ras-related protein Rab-2-B 
 sbi-r.1   8055424   ras-related protein Rab-2-B 
 sot-r.1   102600913   ras-related protein RABB1c 
 sot-r.1   102600740   ras-related protein RABB1c-like 
 sot-r.1   102592580   ras-related protein RABB1c-like 
 cit-r.1   102607023   ras-related protein RABB1b 
 cit-r.1   102624822   ras-related protein RABB1c 
 bdi-r.1   100823809   ras-related protein Rab-2-A 
 bdi-r.1   100846022   ras-related protein Rab-2-B 
 bdi-r.1   100833955   ras-related protein Rab-2-B 
 nta-r.1   107771805   ras-related protein RABB1b 
 nta-r.1   107814904   ras-related protein RABB1c 
 nta-r.1   107813663   ras-related protein RABB1c-like 

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Top 50 coexpressed genes to CHLRE_09g390763v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g390763v5 (cre-r.1 coexpression data)

CoexMap"5720639"


creCHLRE_09g390763v5 | Entrez gene ID : 5720639      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 2 2 1 2 3 3 2 1 1 3 3 2 3 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005794 [list] [network] Golgi apparatus  (203 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
Protein XP_001695070.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 2,  nucl 1,  chlo 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_001695070.1)
Subcellular
localization
TargetP
other 7,  scret 5  (predict for XP_001695070.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g390763v5
ath-u.5
for
RABB1C
ath-u.5
for
GB2
gma-u.5
for
100784816
gma-u.5
for
100797461
gma-u.5
for
100790031
sly-u.5
for
101253324
sly-u.5
for
101257123
osa-u.5
for
4329809
osa-u.5
for
4336117
zma-u.5
for
542765
bra-r.6
for
103868349
bra-r.6
for
103872509
vvi-u.5
for
100263184
vvi-u.5
for
100260965
vvi-u.5
for
100243270
ppo-u.5
for
7478579
ppo-u.5
for
18105986
ppo-u.5
for
7489186
mtr-u.5
for
11416007
mtr-u.5
for
11407181
tae-r.2
for
123127566
hvu-r.1
for
123405971
ghi-r.1
for
107954732
ghi-r.1
for
107892138
ghi-r.1
for
107892242
bna-r.1
for
111211993
bna-r.1
for
111207447
bna-r.1
for
106352248
sbi-r.1
for
8058685
sbi-r.1
for
8055424
sot-r.1
for
102600913
sot-r.1
for
102600740
sot-r.1
for
102592580
cit-r.1
for
102607023
cit-r.1
for
102624822
bdi-r.1
for
100823809
bdi-r.1
for
100846022
bdi-r.1
for
100833955
nta-r.1
for
107771805
nta-r.1
for
107814904
nta-r.1
for
107813663


Ortholog ID: 1512
Species cre ath ath gma gma gma sly sly osa osa zma bra bra vvi vvi vvi ppo ppo ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sbi sot sot sot cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_09g390763v5 RABB1C GB2 LOC100784816 LOC100797461 LOC100790031 LOC101257123 LOC101252198 LOC4329809 LOC4336117 LOC542765 LOC103868349 LOC103862440 LOC100263184 LOC100260965 LOC100243270 LOC7478579 LOC18105986 LOC7489186 LOC11416007 LOC11407181 LOC123127566 LOC123053592 LOC606344 LOC123405971 LOC107954732 LOC107892242 LOC107926356 LOC111207447 LOC106437479 LOC106445061 LOC8058685 LOC8055424 LOC102600740 LOC102592580 LOC102586319 LOC102607023 LOC102624822 LOC100823809 LOC100846022 LOC100833955 LOC107813663 LOC107774510 LOC107824202
Function* uncharacterized protein RAB GTPase homolog B1C GTP-binding 2 ras-related protein RABB1c ras-related protein RABB1b-like ras-related protein RABB1b ras-related protein RABB1b ras-related protein RABB1c ras-related protein Rab-2-B ras-related protein Rab-2-B ras-like gene ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1b ras-related protein RABB1b-like ras-related protein RABB1c ras-related protein RABB1c ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein RABB1c-like ras-related protein RABB1c-like ras-related protein RABB1b ras-related protein RABB1b ras-related protein RABB1c ras-related protein Rab-2-A ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein RABB1c-like ras-related protein RABB1c ras-related protein RABB1c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 5
cre03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04130 SNARE interactions in vesicular transport 4
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 7
osa00190 Oxidative phosphorylation 6
osa04144 Endocytosis 4
osa04142 Lysosome 4
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 5
zma04144 Endocytosis 4
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo03272 Virion - Hepatitis viruses 2
ppo04136 Autophagy - other 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04142 Lysosome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04120 Ubiquitin mediated proteolysis 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr04130 SNARE interactions in vesicular transport 2
mtr04144 Endocytosis 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01212 Fatty acid metabolism 3
tae00071 Fatty acid degradation 3
tae00410 beta-Alanine metabolism 2
tae00592 alpha-Linolenic acid metabolism 2
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00410 beta-Alanine metabolism 8
tae00330 Arginine and proline metabolism 8
tae00071 Fatty acid degradation 7
tae01200 Carbon metabolism 5
tae00770 Pantothenate and CoA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 3
bna04142 Lysosome 3
bna00051 Fructose and mannose metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi00600 Sphingolipid metabolism 2
sbi04142 Lysosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi03250 Viral life cycle - HIV-1 3
sbi03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 4
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5720639 827428 829740 100784816 100797461 100790031 101257123 101252198 4329809 4336117 542765 103868349 103862440 100263184 100260965 100243270 7478579 18105986 7489186 11416007 11407181 123127566 123053592 606344 123405971 107954732 107892242 107926356 111207447 106437479 106445061 8058685 8055424 102600740 102592580 102586319 102607023 102624822 100823809 100846022 100833955 107813663 107774510 107824202
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