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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478579   ras-related protein RABB1b 
 ppo-r.4   7478579   ras-related protein RABB1b 
 ppo-m.4   7478579   ras-related protein RABB1b 
 ppo-u.5   18105986   ras-related protein RABB1c 
 ppo-u.5   7489186   ras-related protein RABB1c 
 gma-u.5   100784816   ras-related protein RABB1c 
 gma-u.5   100797461   ras-related protein RABB1b-like 
 gma-u.5   100790031   ras-related protein RABB1b 
 mtr-u.5   11416007   ras-related protein RABB1b 
 mtr-u.5   11407181   ras-related protein RABB1c 
 ath-u.5   RABB1C   RAB GTPase homolog B1C 
 ath-u.5   GB2   GTP-binding 2 
 vvi-u.5   100263184   ras-related protein RABB1c 
 vvi-u.5   100260965   ras-related protein RABB1b 
 vvi-u.5   100243270   ras-related protein RABB1c 
 sly-u.5   101253324   ras-related protein RABB1c 
 sly-u.5   101257123   ras-related protein RABB1b 
 osa-u.5   4329809   ras-related protein Rab-2-B 
 osa-u.5   4336117   ras-related protein Rab-2-B 
 zma-u.5   542765   ras-like gene 

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Top 50 coexpressed genes to 7478579 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478579 (ppo-u.5 coexpression data)

CoexMap"7478579"


ppoLOC7478579 | Entrez gene ID : 7478579    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 2 3 2 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030100 [list] [network] regulation of endocytosis  (1 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (204 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_002312839.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1  (predict for XP_002312839.1)
Subcellular
localization
TargetP
other 8,  scret 4  (predict for XP_002312839.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478579

.
ppo-r.4
for
7478579

.
ppo-m.4
for
7478579

.
ppo-u.5
for
18105986

.
ppo-u.5
for
7489186

.
gma-u.5
for
100784816

.
gma-u.5
for
100797461

.
gma-u.5
for
100790031

.
mtr-u.5
for
11416007

.
mtr-u.5
for
11407181

.
ath-u.5
for
RABB1C

.
ath-u.5
for
GB2

.
vvi-u.5
for
100263184

.
vvi-u.5
for
100260965

.
vvi-u.5
for
100243270

.
sly-u.5
for
101253324

.
sly-u.5
for
101257123

.
osa-u.5
for
4329809

.
osa-u.5
for
4336117

.
zma-u.5
for
542765

.


Ortholog ID: 1512
Species ath gma gma sly osa osa bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RABB1C LOC100790031 LOC100797461 LOC101252198 LOC4329809 LOC4336117 LOC103862440 LOC100263184 LOC100243270 LOC7478579 LOC18105986 LOC11407181 LOC123127566 LOC123053592 LOC123405971 LOC107892242 LOC107954732 LOC106445061 LOC111207447 CHLRE_09g390763v5 LOC8058685 LOC8055424 LOC102600740 LOC102592580 LOC102624822 LOC102607023 LOC100823809 LOC100833955 LOC107813663 LOC107774510
Function* RAB GTPase homolog B1C ras-related protein RABB1b ras-related protein RABB1b-like ras-related protein RABB1c ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1c ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1c ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein RABB1b ras-related protein RABB1c ras-related protein RABB1c ras-related protein RABB1b-like uncharacterized protein ras-related protein Rab-2-B ras-related protein Rab-2-B ras-related protein RABB1c-like ras-related protein RABB1c-like ras-related protein RABB1c ras-related protein RABB1b ras-related protein Rab-2-A ras-related protein Rab-2-B ras-related protein RABB1c-like ras-related protein RABB1c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04130 SNARE interactions in vesicular transport 4
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 7
osa00190 Oxidative phosphorylation 6
osa04144 Endocytosis 4
osa04142 Lysosome 4
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo03272 Virion - Hepatitis viruses 2
ppo04136 Autophagy - other 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04142 Lysosome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr04130 SNARE interactions in vesicular transport 2
mtr04144 Endocytosis 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01212 Fatty acid metabolism 3
tae00071 Fatty acid degradation 3
tae00410 beta-Alanine metabolism 2
tae00592 alpha-Linolenic acid metabolism 2
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 3
bna04142 Lysosome 3
bna00051 Fructose and mannose metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 5
cre03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi00600 Sphingolipid metabolism 2
sbi04142 Lysosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi03250 Viral life cycle - HIV-1 3
sbi03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 4
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827428 100790031 100797461 101252198 4329809 4336117 103862440 100263184 100243270 7478579 18105986 11407181 123127566 123053592 123405971 107892242 107954732 106445061 111207447 5720639 8058685 8055424 102600740 102592580 102624822 102607023 100823809 100833955 107813663 107774510
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