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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g278900v5   uncharacterized protein 
 ath-u.5   MOS7   nuclear pore complex protein-like protein 
 gma-u.5   100801853   nuclear pore complex protein NUP88 
 sly-u.5   101254353   nuclear pore complex protein NUP88-like 
 sly-u.5   101248262   nuclear pore complex protein NUP88 
 osa-u.5   4336930   nuclear pore complex protein NUP88 
 zma-u.5   100272301   uncharacterized LOC100272301 
 bra-r.6   103846909   nuclear pore complex protein NUP88 
 vvi-u.5   100265724   nuclear pore complex protein NUP88 
 ppo-u.5   18102695   nuclear pore complex protein NUP88 
 ppo-u.5   7494488   nuclear pore complex protein NUP88 
 mtr-u.5   11422606   nuclear pore complex protein NUP88 
 tae-r.2   123054363   nuclear pore complex protein NUP88 
 tae-r.2   123190240   nuclear pore complex protein NUP88 
 tae-r.2   123046505   nuclear pore complex protein NUP88 
 hvu-r.1   123427667   nuclear pore complex protein NUP88 
 ghi-r.1   107931823   nuclear pore complex protein NUP88 
 ghi-r.1   121222637   nuclear pore complex protein NUP88 
 bna-r.1   106419350   nuclear pore complex protein NUP88 
 bna-r.1   106439684   nuclear pore complex protein NUP88-like 
 sbi-r.1   8063938   nuclear pore complex protein NUP88 
 sot-r.1   102585027   nuclear pore complex protein NUP88-like 
 cit-r.1   102608157   nuclear pore complex protein NUP88 
 bdi-r.1   100822200   nuclear pore complex protein NUP88 
 nta-r.1   107790996   nuclear pore complex protein NUP88 
 nta-r.1   107779325   nuclear pore complex protein NUP88 

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Top 50 coexpressed genes to CHLRE_06g278900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g278900v5 (cre-r.1 coexpression data)

CoexMap"5720870"


creCHLRE_06g278900v5 | Entrez gene ID : 5720870    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 2 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000056 [list] [network] ribosomal small subunit export from nucleus  (4 genes)  IEA  
GO:0000055 [list] [network] ribosomal large subunit export from nucleus  (6 genes)  IEA  
GO:0006406 [list] [network] mRNA export from nucleus  (27 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (40 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (40 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (26 genes)  IEA  
Protein XP_042923933.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 2,  E.R._plas 2,  plas 1,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_042923933.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042923933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g278900v5
ath-u.5
for
MOS7
gma-u.5
for
100801853
sly-u.5
for
101254353
sly-u.5
for
101248262
osa-u.5
for
4336930
zma-u.5
for
100272301
bra-r.6
for
103846909
vvi-u.5
for
100265724
ppo-u.5
for
18102695
ppo-u.5
for
7494488
mtr-u.5
for
11422606
tae-r.2
for
123054363
tae-r.2
for
123190240
tae-r.2
for
123046505
hvu-r.1
for
123427667
ghi-r.1
for
107931823
ghi-r.1
for
121222637
bna-r.1
for
106419350
bna-r.1
for
106439684
sbi-r.1
for
8063938
sot-r.1
for
102585027
cit-r.1
for
102608157
bdi-r.1
for
100822200
nta-r.1
for
107790996
nta-r.1
for
107779325


Ortholog ID: 9637
Species cre ath gma sly sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_06g278900v5 MOS7 LOC100801853 LOC101254353 LOC101248262 LOC4336930 LOC100272301 LOC103846909 LOC100265724 LOC18102695 LOC7494488 LOC11422606 LOC123054363 LOC123190240 LOC123046505 LOC123427667 LOC107931823 LOC121222637 LOC106419350 LOC106439684 LOC8063938 LOC102585027 LOC102608157 LOC100822200 LOC107790996 LOC107779325
Function* uncharacterized protein nuclear pore complex protein-like protein nuclear pore complex protein NUP88 nuclear pore complex protein NUP88-like nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 uncharacterized LOC100272301 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88-like nuclear pore complex protein NUP88 nuclear pore complex protein NUP88-like nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03040 Spliceosome 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03040 Spliceosome 4
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 14
tae03440 Homologous recombination 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5720870 830452 100801853 101254353 101248262 4336930 100272301 103846909 100265724 18102695 7494488 11422606 123054363 123190240 123046505 123427667 107931823 121222637 106419350 106439684 8063938 102585027 102608157 100822200 107790996 107779325
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