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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g672150v5   uncharacterized protein 
 ath-u.5   AT3G23900   RNA recognition motif (RRM)-containing protein 
 gma-u.5   100790138   uncharacterized LOC100790138 
 sly-u.5   101244905   uncharacterized LOC101244905 
 osa-u.5   4326462   uncharacterized LOC4326462 
 zma-u.5   103649930   nipped-B-like protein B 
 zma-u.5   100279216   RNA recognition motif (RRM)-containing protein 
 bra-r.6   103828698   serine/arginine repetitive matrix protein 2 
 vvi-u.5   100244513   uncharacterized LOC100244513 
 ppo-u.5   18107089   uncharacterized LOC18107089 
 ppo-u.5   7461644   uncharacterized LOC7461644 
 mtr-u.5   25501793   serine/arginine repetitive matrix protein 2 
 tae-r.2   123077219   uncharacterized LOC123077219 
 tae-r.2   123068711   uncharacterized LOC123068711 
 tae-r.2   123060215   uncharacterized LOC123060215 
 hvu-r.1   123442752   uncharacterized LOC123442752 
 ghi-r.1   107934462   serine/arginine repetitive matrix protein 2 
 ghi-r.1   107939141   serine/arginine repetitive matrix protein 2 
 ghi-r.1   107915112   serine/arginine repetitive matrix protein 1 
 bna-r.1   106357849   serine/arginine repetitive matrix protein 2 
 bna-r.1   106406042   serine/arginine-rich splicing factor 4 
 sbi-r.1   8072378   serine/arginine-rich splicing factor 11 
 sot-r.1   102606029   splicing regulatory glutamine/lysine-rich protein 1 
 cit-r.1   102615780   uncharacterized LOC102615780 
 bdi-r.1   100843156   serine/arginine-rich splicing factor 11 
 nta-r.1   107802588   uncharacterized LOC107802588 
 nta-r.1   107801541   uncharacterized LOC107801541 

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Top 50 coexpressed genes to CHLRE_16g672150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g672150v5 (cre-r.1 coexpression data)

CoexMap"5721398"


creCHLRE_16g672150v5 | Entrez gene ID : 5721398    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 2 1 1 2 1 3 1 3 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001695802.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  mito 1,  vacu 1  (predict for XP_001695802.2)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_001695802.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g672150v5
ath-u.5
for
AT3G23900
gma-u.5
for
100790138
sly-u.5
for
101244905
osa-u.5
for
4326462
zma-u.5
for
103649930
zma-u.5
for
100279216
bra-r.6
for
103828698
vvi-u.5
for
100244513
ppo-u.5
for
18107089
ppo-u.5
for
7461644
mtr-u.5
for
25501793
tae-r.2
for
123077219
tae-r.2
for
123068711
tae-r.2
for
123060215
hvu-r.1
for
123442752
ghi-r.1
for
107934462
ghi-r.1
for
107939141
ghi-r.1
for
107915112
bna-r.1
for
106357849
bna-r.1
for
106406042
sbi-r.1
for
8072378
sot-r.1
for
102606029
cit-r.1
for
102615780
bdi-r.1
for
100843156
nta-r.1
for
107802588
nta-r.1
for
107801541


Ortholog ID: 8025
Species cre ath gma sly osa zma zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_16g672150v5 AT3G23900 LOC100790138 LOC101244905 LOC4326462 LOC103649930 LOC100279216 LOC103828698 LOC100244513 LOC18107089 LOC7461644 LOC25501793 LOC123077219 LOC123068711 LOC123060215 LOC123442752 LOC107939141 LOC107915112 LOC107914739 LOC106357849 LOC106406042 LOC8072378 LOC102606029 LOC102615780 LOC100843156 LOC107802588 LOC107801541
Function* uncharacterized protein RNA recognition motif (RRM)-containing protein uncharacterized LOC100790138 uncharacterized LOC101244905 uncharacterized LOC4326462 nipped-B-like protein B RNA recognition motif (RRM)-containing protein serine/arginine repetitive matrix protein 2 uncharacterized LOC100244513 uncharacterized LOC18107089 uncharacterized LOC7461644 serine/arginine repetitive matrix protein 2 uncharacterized LOC123077219 uncharacterized LOC123068711 uncharacterized LOC123060215 uncharacterized LOC123442752 serine/arginine repetitive matrix protein 2 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 2 serine/arginine repetitive matrix protein 2 serine/arginine-rich splicing factor 4 serine/arginine-rich splicing factor 11 splicing regulatory glutamine/lysine-rich protein 1 uncharacterized LOC102615780 serine/arginine-rich splicing factor 11 uncharacterized LOC107802588 uncharacterized LOC107801541
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta03013 Nucleocytoplasmic transport 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5721398 821973 100790138 101244905 4326462 103649930 100279216 103828698 100244513 18107089 7461644 25501793 123077219 123068711 123060215 123442752 107939141 107915112 107914739 106357849 106406042 8072378 102606029 102615780 100843156 107802588 107801541
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