ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7461644	uncharacterized LOC7461644
ppo-r.4	7461644	uncharacterized LOC7461644
ppo-u.5	18107089	uncharacterized LOC18107089
gma-u.5	100790138	uncharacterized LOC100790138
mtr-u.5	25501793	serine/arginine repetitive matrix protein 2
ath-u.5	AT3G23900	RNA recognition motif (RRM)-containing protein
vvi-u.5	100244513	uncharacterized LOC100244513
sly-u.5	101244905	uncharacterized LOC101244905
osa-u.5	4326462	uncharacterized LOC4326462
zma-u.5	103649930	nipped-B-like protein B
zma-u.5	100279216	RNA recognition motif (RRM)-containing protein

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding	(1480 genes)	IEA
GO:0005515 [list] [network] protein binding	(4916 genes)	IEA

Protein

XP_024464028.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, mito 1, pero 1

(predict for XP_024464028.1)

Subcellular
localization
TargetP

other 6, chlo 3

(predict for XP_024464028.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7461644 .	ppo-r.4 for 7461644 .	ppo-u.5 for 18107089 .	gma-u.5 for 100790138 .	mtr-u.5 for 25501793 .	ath-u.5 for AT3G23900 .	vvi-u.5 for 100244513 .	sly-u.5 for 101244905 .	osa-u.5 for 4326462 .	zma-u.5 for 103649930 .	zma-u.5 for 100279216 .

Ortholog ID: 8025

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

RNA recognition motif (RRM)-containing protein

uncharacterized LOC100790138

uncharacterized LOC101244905

uncharacterized LOC4326462

nipped-B-like protein B

RNA recognition motif (RRM)-containing protein

serine/arginine repetitive matrix protein 2

uncharacterized LOC100244513

uncharacterized LOC7461644

uncharacterized LOC18107089

serine/arginine repetitive matrix protein 2

uncharacterized LOC123068711

uncharacterized LOC123077219

uncharacterized LOC123442752

serine/arginine repetitive matrix protein 2

serine/arginine repetitive matrix protein 1

serine/arginine repetitive matrix protein 2

serine/arginine-rich splicing factor 4

uncharacterized protein

serine/arginine-rich splicing factor 11

splicing regulatory glutamine/lysine-rich protein 1

uncharacterized LOC102615780

serine/arginine-rich splicing factor 11

uncharacterized LOC107801541

uncharacterized LOC107802588

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2
ath03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo03015	mRNA surveillance pathway	3
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	10
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	10
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03013	Nucleocytoplasmic transport	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

821973

100790138

101244905

4326462

103649930

100279216

103828698

100244513

7461644

18107089

25501793

123068711

123077219

123442752

107939141

107915112

106357849

106406042

5721398

8072378

102606029

102615780

100843156

107801541

107802588

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7461644 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7461644 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	3	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7461644 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7461644 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**