ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g270650v5	uncharacterized protein
ath-u.5	AT3G59650	mitochondrial ribosomal protein L51/S25/CI-B8 family protein
gma-u.5	100813455	54S ribosomal protein L51, mitochondrial
gma-u.5	100778783	54S ribosomal protein L51, mitochondrial
sly-u.5	101244479	mitochondrial ribosomal protein L51/S25/CI-B8 family protein
osa-u.5	9266128	large ribosomal subunit protein mL43
zma-u.5	100191814	mitochondrial ribosomal protein L51/S25/CI-B8 family protein
zma-u.5	100282391	uncharacterized LOC100282391
bra-r.6	103841810	54S ribosomal protein L51, mitochondrial
bra-r.6	103830223	54S ribosomal protein L51, mitochondrial
vvi-u.5	100254168	large ribosomal subunit protein mL43
ppo-u.5	18104582	54S ribosomal protein L51, mitochondrial
mtr-u.5	11440382	54S ribosomal protein L51, mitochondrial
tae-r.2	123069328	54S ribosomal protein L51, mitochondrial
tae-r.2	123077851	54S ribosomal protein L51, mitochondrial
tae-r.2	123085017	54S ribosomal protein L51, mitochondrial
hvu-r.1	123449375	54S ribosomal protein L51, mitochondrial
ghi-r.1	107949176	54S ribosomal protein L51, mitochondrial
ghi-r.1	107914464	54S ribosomal protein L51, mitochondrial
ghi-r.1	107914614	54S ribosomal protein L51, mitochondrial
bna-r.1	106406431	54S ribosomal protein L51, mitochondrial
bna-r.1	111198641	54S ribosomal protein L51, mitochondrial-like
bna-r.1	106429520	54S ribosomal protein L51, mitochondrial
sbi-r.1	8065731	54S ribosomal protein L51, mitochondrial
sbi-r.1	8054223	54S ribosomal protein L51, mitochondrial
sot-r.1	102592446	54S ribosomal protein L51, mitochondrial
cit-r.1	102614735	54S ribosomal protein L51, mitochondrial
bdi-r.1	100821546	54S ribosomal protein L51, mitochondrial
nta-r.1	107808930	large ribosomal subunit protein mL43
nta-r.1	107765301	large ribosomal subunit protein mL43-like

Annotation

functional annotation

KEGG

cre03010 [list] [network] Ribosome (149 genes)

GO BP

GO:0032543 [list] [network] mitochondrial translation

(16 genes)

IEA

GO CC

GO:0005762 [list] [network] mitochondrial large ribosomal subunit

(16 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(164 genes)

IEA

Protein

XP_001696224.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 2, nucl 2

(predict for XP_001696224.2)

Subcellular
localization
TargetP

other 7

(predict for XP_001696224.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g270650v5	ath-u.5 for AT3G59650	gma-u.5 for 100813455	gma-u.5 for 100778783	sly-u.5 for 101244479	osa-u.5 for 9266128	zma-u.5 for 100191814	zma-u.5 for 100282391	bra-r.6 for 103841810	bra-r.6 for 103830223	vvi-u.5 for 100254168	ppo-u.5 for 18104582	mtr-u.5 for 11440382	tae-r.2 for 123069328	tae-r.2 for 123077851	tae-r.2 for 123085017	hvu-r.1 for 123449375	ghi-r.1 for 107949176	ghi-r.1 for 107914464	ghi-r.1 for 107914614	bna-r.1 for 106406431	bna-r.1 for 111198641	bna-r.1 for 106429520	sbi-r.1 for 8065731	sbi-r.1 for 8054223	sot-r.1 for 102592446	cit-r.1 for 102614735	bdi-r.1 for 100821546	nta-r.1 for 107808930	nta-r.1 for 107765301

Ortholog

Ortholog ID: 6026

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

mitochondrial ribosomal protein L51/S25/CI-B8 family protein

54S ribosomal protein L51, mitochondrial

mitochondrial ribosomal protein L51/S25/CI-B8 family protein

large ribosomal subunit protein mL43

mitochondrial ribosomal protein L51/S25/CI-B8 family protein

uncharacterized LOC100282391

54S ribosomal protein L51, mitochondrial

large ribosomal subunit protein mL43

54S ribosomal protein L51, mitochondrial

54S ribosomal protein L51, mitochondrial-like

54S ribosomal protein L51, mitochondrial

large ribosomal subunit protein mL43

large ribosomal subunit protein mL43-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma03040	Spliceosome	5
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2
sly00190	Oxidative phosphorylation	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	6
zma03040	Spliceosome	3
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	10
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi03013	Nucleocytoplasmic transport	2
ghi03015	mRNA surveillance pathway	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	11
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	6
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

Expression

Expression pattern

Entrez Gene ID^*

5721849

825134

100813455

100778783

101244479

9266128

100191814

100282391

103841810

103830223

100254168

18104582

11440382

123069328

123093050

123060770

123449375

107949176

107914614

107937417

106406431

111198641

106429520

8065731

8054223

102592446

102614735

100821546

107808930

107765301

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g270650v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g270650v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	2	2	1	1	1	3	1	3	3	2	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g270650v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g270650v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**