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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g159400v5   uncharacterized protein 
 ath-u.5   AT5G37530   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   100815445   tRNA threonylcarbamoyladenosine dehydratase 
 gma-u.5   100798982   tRNA threonylcarbamoyladenosine dehydratase 
 sly-u.5   101261624   tRNA threonylcarbamoyladenosine dehydratase 
 osa-u.5   4340655   tRNA threonylcarbamoyladenosine dehydratase 
 zma-u.5   100284561   mitochondrion protein 
 vvi-u.5   100263875   tRNA threonylcarbamoyladenosine dehydratase 
 ppo-u.5   7493577   tRNA threonylcarbamoyladenosine dehydratase 2 
 mtr-u.5   11428715   tRNA threonylcarbamoyladenosine dehydratase 2 
 tae-r.2   123165066   tRNA threonylcarbamoyladenosine dehydratase 2 
 tae-r.2   123155514   tRNA threonylcarbamoyladenosine dehydratase 
 tae-r.2   123149663   tRNA threonylcarbamoyladenosine dehydratase 
 hvu-r.1   123408425   tRNA threonylcarbamoyladenosine dehydratase 2 
 ghi-r.1   107895318   tRNA threonylcarbamoyladenosine dehydratase 
 ghi-r.1   107912884   tRNA threonylcarbamoyladenosine dehydratase 2 
 bna-r.1   106410156   tRNA threonylcarbamoyladenosine dehydratase-like 
 bna-r.1   106445020   tRNA threonylcarbamoyladenosine dehydratase-like 
 sbi-r.1   8061504   tRNA threonylcarbamoyladenosine dehydratase 
 sot-r.1   102595601   tRNA threonylcarbamoyladenosine dehydratase 
 cit-r.1   102619567   tRNA threonylcarbamoyladenosine dehydratase 
 bdi-r.1   100844856   tRNA threonylcarbamoyladenosine dehydratase 
 nta-r.1   107832280   tRNA threonylcarbamoyladenosine dehydratase 
 nta-r.1   107825010   tRNA threonylcarbamoyladenosine dehydratase-like 

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Top 50 coexpressed genes to CHLRE_03g159400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g159400v5 (cre-r.1 coexpression data)

CoexMap"5723009"


creCHLRE_03g159400v5 | Entrez gene ID : 5723009      
Species cre ath gma sly osa zma vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta bra
Paralog 1 1 2 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061504 [list] [network] cyclic threonylcarbamoyladenosine biosynthetic process  (2 genes)  IEA  
GO CC
GO:0009536 [list] [network] plastid  (228 genes)  IEA  
GO MF
GO:0061503 [list] [network] tRNA threonylcarbamoyladenosine dehydratase  (2 genes)  IEA  
GO:0008641 [list] [network] ubiquitin-like modifier activating enzyme activity  (10 genes)  IEA  
Protein XP_001697503.2 [sequence] [blastp]
XP_042925797.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  chlo_mito 2,  cyto 1,  mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_001697503.2)
chlo 3,  E.R. 2,  chlo_mito 2,  cyto 1,  mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_042925797.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_001697503.2)
mito 4  (predict for XP_042925797.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g159400v5
ath-u.5
for
AT5G37530
gma-u.5
for
100815445
gma-u.5
for
100798982
sly-u.5
for
101261624
osa-u.5
for
4340655
zma-u.5
for
100284561
vvi-u.5
for
100263875
ppo-u.5
for
7493577
mtr-u.5
for
11428715
tae-r.2
for
123165066
tae-r.2
for
123155514
tae-r.2
for
123149663
hvu-r.1
for
123408425
ghi-r.1
for
107895318
ghi-r.1
for
107912884
bna-r.1
for
106410156
bna-r.1
for
106445020
sbi-r.1
for
8061504
sot-r.1
for
102595601
cit-r.1
for
102619567
bdi-r.1
for
100844856
nta-r.1
for
107832280
nta-r.1
for
107825010


Ortholog ID: 10967
Species cre ath gma gma sly osa zma vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g159400v5 AT5G37530 LOC100815445 LOC100798982 LOC101261624 LOC4340655 LOC100284561 LOC100263875 LOC7493577 LOC11428715 LOC123165066 LOC123155514 LOC123149663 LOC123408425 LOC107895318 LOC107912884 LOC106410156 LOC106445020 LOC8061504 LOC102595601 LOC102619567 LOC100844856 LOC107832280 LOC107825010
Function* uncharacterized protein NAD(P)-binding Rossmann-fold superfamily protein tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase mitochondrion protein tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase 2 tRNA threonylcarbamoyladenosine dehydratase-like tRNA threonylcarbamoyladenosine dehydratase-like tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase tRNA threonylcarbamoyladenosine dehydratase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo04120 Ubiquitin mediated proteolysis 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03010 Ribosome 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03030 DNA replication 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03040 Spliceosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723009 833731 100815445 100798982 101261624 4340655 100284561 100263875 7493577 11428715 123165066 123155514 123149663 123408425 107895318 107912884 106410156 106445020 8061504 102595601 102619567 100844856 107832280 107825010
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