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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g156900v5   uncharacterized protein 
 cre-r.1   CHLRE_06g283950v5   uncharacterized protein 
 cre-r.1   CHLRE_01g066917v5   uncharacterized protein 
 cre-r.1   CHLRE_12g548950v5   uncharacterized protein 
 ath-u.5   CAB2   chlorophyll A/B-binding protein 2 
 ath-u.5   CAB1   chlorophyll A/B binding protein 1 
 ath-u.5   CAB3   chlorophyll A/B binding protein 3 
 gma-u.5   100805310   chlorophyll a-b binding protein 3, chloroplastic-like 
 gma-u.5   100793702   chlorophyll a-b binding protein 151, chloroplastic-like 
 gma-u.5   LHCB1-7   photosystem II type I chlorophyll a/b-binding protein 
 sly-u.5   Cab-3C   chlorophyll a/b-binding protein Cab-3C 
 sly-u.5   101267774   chlorophyll a-b binding protein 1-like 
 osa-u.5   4346803   chlorophyll a-b binding protein 1, chloroplastic-like 
 osa-u.5   4333359   chlorophyll a-b binding protein, chloroplastic-like 
 osa-u.5   4324705   chlorophyll a-b binding protein 2, chloroplastic-like 
 zma-u.5   100193833   light harvesting complex mesophyll 7 
 zma-u.5   100282054   chlorophyll a-b binding protein 2 
 zma-u.5   100274453   light harvesting chlorophyll a/b binding protein1 
 bra-r.6   103857533   chlorophyll a-b binding protein 1, chloroplastic 
 bra-r.6   103854220   chlorophyll a-b binding protein 2.4, chloroplastic 
 bra-r.6   103840451   chlorophyll a-b binding protein 1, chloroplastic 
 vvi-u.5   100254533   chlorophyll a-b binding protein 151, chloroplastic-like 
 vvi-u.5   100245214   chlorophyll a-b binding protein 40, chloroplastic-like 
 ppo-u.5   7489858   chlorophyll a-b binding protein 5, chloroplastic 
 ppo-u.5   7493970   chlorophyll a-b binding protein of LHCII type 1 
 ppo-u.5   7493971   chlorophyll a-b binding protein of LHCII type 1 
 mtr-u.5   11414909   chlorophyll a-b binding protein of LHCII type 1 
 mtr-u.5   11427672   chlorophyll a-b binding protein of LHCII type 1 
 mtr-u.5   25493394   chlorophyll a-b binding protein AB80, chloroplastic 
 tae-r.2   123160302   chlorophyll a-b binding protein of LHCII type 1 
 tae-r.2   123175700   chlorophyll a-b binding protein of LHCII type 1-like 
 tae-r.2   123169666   chlorophyll a-b binding protein of LHCII type 1 
 hvu-r.1   123450709   chlorophyll a-b binding protein of LHCII type 1-like 
 hvu-r.1   123447768   chlorophyll a-b binding protein of LHCII type 1 
 hvu-r.1   123412763   chlorophyll a-b binding protein of LHCII type 1-like 
 ghi-r.1   107905868   chlorophyll a-b binding protein of LHCII type 1 
 ghi-r.1   121229382   chlorophyll a-b binding protein of LHCII type 1 
 ghi-r.1   107955629   chlorophyll a-b binding protein 151, chloroplastic-like 
 bna-r.1   106401200   chlorophyll a-b binding protein 2.4, chloroplastic 
 bna-r.1   125585614   chlorophyll a-b binding protein 1, chloroplastic-like 
 bna-r.1   125603606   chlorophyll a-b binding protein 1, chloroplastic-like 
 sbi-r.1   8062994   chlorophyll a-b binding protein 5, chloroplastic 
 sbi-r.1   8074608   chlorophyll a-b binding protein M9, chloroplastic 
 sbi-r.1   8082496   chlorophyll a-b binding protein of LHCII type 1 
 sot-r.1   102594652   chlorophyll a-b binding protein 1C, chloroplastic 
 sot-r.1   102594074   chlorophyll a-b binding protein 4, chloroplastic 
 sot-r.1   102593779   chlorophyll a-b binding protein 1C, chloroplastic 
 cit-r.1   102625299   chlorophyll a-b binding protein of LHCII type 1 
 cit-r.1   102610533   chlorophyll a-b binding protein 151, chloroplastic 
 cit-r.1   102626435   chlorophyll a-b binding protein of LHCII type 1 
 bdi-r.1   100822184   chlorophyll a-b binding protein of LHCII type 1 
 bdi-r.1   100828241   chlorophyll a-b binding protein of LHCII type 1 
 bdi-r.1   100841670   chlorophyll a-b binding protein of LHCII type 1 
 nta-r.1   107773487   chlorophyll a-b binding protein 16, chloroplastic-like 
 nta-r.1   107773808   chlorophyll a-b binding protein 40, chloroplastic-like 
 nta-r.1   107775016   chlorophyll a-b binding protein 40, chloroplastic 

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Top 50 coexpressed genes to CHLRE_03g156900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g156900v5 (cre-r.1 coexpression data)

CoexMap"5723050"


creCHLRE_03g156900v5 | Entrez gene ID : 5723050      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 4 3 3 2 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00196 [list] [network] Photosynthesis - antenna proteins (20 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (25 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (39 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (14 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (42 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (43 genes)  IEA  
GO MF
Protein XP_001697526.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_001697526.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_001697526.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g156900v5
cre-r.1
for
CHLRE_06g283950v5
cre-r.1
for
CHLRE_01g066917v5
cre-r.1
for
CHLRE_12g548950v5
ath-u.5
for
CAB2
ath-u.5
for
CAB1
ath-u.5
for
CAB3
gma-u.5
for
100805310
gma-u.5
for
100793702
gma-u.5
for
LHCB1-7
sly-u.5
for
Cab-3C
sly-u.5
for
101267774
osa-u.5
for
4346803
osa-u.5
for
4333359
osa-u.5
for
4324705
zma-u.5
for
100193833
zma-u.5
for
100282054
zma-u.5
for
100274453
bra-r.6
for
103857533
bra-r.6
for
103854220
bra-r.6
for
103840451
vvi-u.5
for
100254533
vvi-u.5
for
100245214
ppo-u.5
for
7489858
ppo-u.5
for
7493970
ppo-u.5
for
7493971
mtr-u.5
for
11414909
mtr-u.5
for
11427672
mtr-u.5
for
25493394
tae-r.2
for
123160302
tae-r.2
for
123175700
tae-r.2
for
123169666
hvu-r.1
for
123450709
hvu-r.1
for
123447768
hvu-r.1
for
123412763
ghi-r.1
for
107905868
ghi-r.1
for
121229382
ghi-r.1
for
107955629
bna-r.1
for
106401200
bna-r.1
for
125585614
bna-r.1
for
125603606
sbi-r.1
for
8062994
sbi-r.1
for
8074608
sbi-r.1
for
8082496
sot-r.1
for
102594652
sot-r.1
for
102594074
sot-r.1
for
102593779
cit-r.1
for
102625299
cit-r.1
for
102610533
cit-r.1
for
102626435
bdi-r.1
for
100822184
bdi-r.1
for
100828241
bdi-r.1
for
100841670
nta-r.1
for
107773487
nta-r.1
for
107773808
nta-r.1
for
107775016


Ortholog ID: 151
Species cre cre cre ath ath gma gma gma sly sly osa osa osa zma zma zma bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta
Symbol CHLRE_01g066917v5 CHLRE_12g548950v5 CHLRE_12g548400v5 LHCB2.3 LHB1B1 LHCB1-7 LOC100799813 CAB3 Cab-3C LOC101245729 LOC4346803 LOC4333359 LOC4324705 LOC100274453 LOC100281879 LOC103643653 LOC103837002 LOC100254533 LOC100252004 LOC100241745 LOC7489858 LOC7493970 LOC7493971 LOC25495304 LOC25495305 LOC25495306 LOC123175700 LOC123060502 LOC123068673 LOC123412763 LOC123412762 LOC123450698 LOC107954948 LOC107954741 LOC107913771 LOC125603606 LOC106432786 LOC106405647 LOC8062994 LOC8082496 LOC8082204 LOC102594074 LOC102594096 LOC102604320 LOC102625299 LOC102610533 LOC102626435 LOC100828241 LOC100841831 LOC104583754 LOC142169108 LOC107791896
Function* uncharacterized protein uncharacterized protein uncharacterized protein photosystem II light harvesting complex protein 2.3 light-harvesting chlorophyll-protein complex II subunit B1 photosystem II type I chlorophyll a/b-binding protein chlorophyll a-b binding protein of LHCII type 1 chlorophyll a/b-binding protein chlorophyll a/b-binding protein Cab-3C chlorophyll a/b-binding protein chlorophyll a-b binding protein 1, chloroplastic-like chlorophyll a-b binding protein, chloroplastic-like chlorophyll a-b binding protein 2, chloroplastic-like light harvesting chlorophyll a/b binding protein1 chlorophyll a-b binding protein chlorophyll a-b binding protein, chloroplastic chlorophyll a-b binding protein 2.4, chloroplastic chlorophyll a-b binding protein 151, chloroplastic-like chlorophyll a-b binding protein 40, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 5, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein 151, chloroplastic chlorophyll a-b binding protein 151, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1-like chlorophyll a-b binding protein 1, chloroplastic-like chlorophyll a-b binding protein 1, chloroplastic chlorophyll a-b binding protein 1, chloroplastic chlorophyll a-b binding protein 5, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 4, chloroplastic chlorophyll a-b binding protein 1C, chloroplastic chlorophyll a-b binding protein 3C, chloroplastic-like chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 151, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 50, chloroplastic-like chlorophyll a-b binding protein 7, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 11
cre00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 9
cre00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 11
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 13
ath00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 11
osa00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 12
osa00195 Photosynthesis 4
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 8
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 18
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 15
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 15
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 10
bra00195 Photosynthesis 3
bra00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 14
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 9
vvi00195 Photosynthesis 4
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 9
vvi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 8
ppo00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 12
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00860 Porphyrin metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 7
mtr00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 8
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 11
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 6
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 6
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 6
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 12
ghi00195 Photosynthesis 4
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 10
sbi00195 Photosynthesis 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 12
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 16
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 14
sot00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
cit00195 Photosynthesis 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 9
cit00195 Photosynthesis 5
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
cit00860 Porphyrin metabolism 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 10
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5725794 5719633 5719625 822391 818006 100800351 100799813 547862 108491835 101245729 4346803 4333359 4324705 100274453 100281879 103643653 103837002 100254533 100252004 100241745 7489858 7493970 7493971 25495304 25495305 25495306 123175700 123060502 123068673 123412763 123412762 123450698 107954948 107954741 107913771 125603606 106432786 106405647 8062994 8082496 8082204 102594074 102594096 102604320 102625299 102610533 102626435 100828241 100841831 104583754 142169108 107791896
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